Protein Alignment TFAM and CG12104

DIOPT Version :9

• Sequence 1: NP_732527.1
• Gene: TFAM / 42433
• FlyBaseID: FBgn0038805
• Length: 284
• Species: Drosophila melanogaster
• Sequence 2: NP_001261267.1
• Gene: CG12104 / 38187
• FlyBaseID: FBgn0035238
• Length: 250
• Species: Drosophila melanogaster
• Alignment Length: 216
• Identity: 43/216 - (19%)
• Similarity: 75/216 - (34%)
• Gaps: 52/216 - (24%)

  Fly    16 GSLINKVRQVVAKDWPPS---------DPSRANDTDHRPLTPPRPLAAASISNTPAVPSKTLEEQ 71
            |..:.::....|:...||         |.|..||.|.....   ..|:....|....|.:  ::.
  Fly    10 GDEVFELTDTPAESQSPSQASRRMLSLDQSMLNDDDEENCD---TYASGGGQNLLVQPEQ--QQN 69

  Fly    72 LGLPPRPKKPLTPYFRFMREQRPKLKAANPQITTVEVVRQLSKNWSDADAQLKERLQAEFKRDQQ 136
            ..:...|.|||.|:..|.|:....:|..||..:..::...:...|...|...|.......:::::
  Fly    70 QAMAQAPPKPLAPFALFFRDTVTAIKQQNPTCSLEQMQVIVQTMWESLDETQKNVYALRHEQEKR 134

  Fly   137 IYVEERTKYDATLTEEQ---RAE--------------------IKQLKQDLVDAK---------- 168
            .||.....|...|:|.:   .||                    ::.|:|. |||:
  Fly   135 EYVRLMRGYRHQLSESEGTSEAEAPPAVATNQPPPLVTTKLESVEDLQQS-VDAQQEPPPDQIQL 198

  Fly   169 --ERRQLRKRVKELGRPKKPA 187
              |..:::|..:|  :..|||
  Fly   199 LTEAARVQKCTRE--QCNKPA 217

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
TFAM	NP_732527.1	HMGB-UBF_HMG-box	78..142	CDD:238686	15/63 (24%)
		HMGB-UBF_HMG-box	183..247	CDD:238686	3/5 (60%)
CG12104	NP_001261267.1	HMG-box	76..140	CDD:238037	15/63 (24%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG5648
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	1	0.900