Protein Alignment TFAM and HmgZ

DIOPT Version :9

• Sequence 1: NP_732527.1
• Gene: TFAM / 42433
• FlyBaseID: FBgn0038805
• Length: 284
• Species: Drosophila melanogaster
• Sequence 2: NP_001286694.1
• Gene: HmgZ / 37480
• FlyBaseID: FBgn0010228
• Length: 111
• Species: Drosophila melanogaster
• Alignment Length: 111
• Identity: 25/111 - (22%)
• Similarity: 47/111 - (42%)
• Gaps: 19/111 - (17%)

  Fly    77 RPKKPLTPYFRFMREQRPKLKAANPQITTVEVVRQLSKNWSDADAQLKERLQAEFKRDQQIYVEE 141
            |||:||:.|..::.|.|.::|..||.....::.::..:.|..    ||::.:.|.|.
  Fly     5 RPKRPLSAYMLWLNETREQIKKDNPGSKVTDIAKRGGELWRG----LKDKTEWEQKA-------- 57

  Fly   142 RTKYDATLTEEQRAEIKQLKQDLVDAKERRQLRKRVKELGRPKKPA 187
                 ..:.||....:|:.:.:  ...:....:||.|...:|.|.|
  Fly    58 -----IKMKEEYNKAVKEYEAN--GGTDSGAPKKRKKAAAKPAKKA 96

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
TFAM	NP_732527.1	HMGB-UBF_HMG-box	78..142	CDD:238686	15/63 (24%)
		HMGB-UBF_HMG-box	183..247	CDD:238686	3/5 (60%)
HmgZ	NP_001286694.1	HMG_box	6..71	CDD:395407	18/81 (22%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG5648
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1641977at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	2	1.910