Protein Alignment TFAM and Sox13

DIOPT Version :9

• Sequence 1: NP_732527.1
• Gene: TFAM / 42433
• FlyBaseID: FBgn0038805
• Length: 284
• Species: Drosophila melanogaster
• Sequence 2: XP_006249824.1
• Gene: Sox13 / 289026
• RGDID: 1309674
• Length: 613
• Species: Rattus norvegicus
• Alignment Length: 258
• Identity: 60/258 - (23%)
• Similarity: 103/258 - (39%)
• Gaps: 47/258 - (18%)

  Fly    31 PPSD-PSRANDTDHRPL-TPPRPL---AAASISNTPAVPSKTLEEQLGLPPRPKKPLTPYFRFMR 90
            ||:. ..|.....|.|| .||:||   |...:|..|...|....:.....|||.....| .|.::
  Rat   262 PPAPVVKRPGVATHHPLQEPPQPLNLTAKPKVSELPNTSSSPSLKMNSCGPRPSSHGAP-TRDLQ 325

  Fly    91 EQRPKLK----AANPQIT-TVEVVRQLSKNWSDADAQLKERLQAEFKRDQQIYVEERTKYDATLT 150
            ...|.|.    .....:| .::..|||..:.|.|   |:....|.|::|       ....|::..
  Rat   326 SSPPNLPLGFLGEGDAVTKAIQDARQLLHSHSGA---LENSPSAPFRKD-------LISLDSSPA 380

  Fly   151 EEQRAE--IKQLKQDLV--DAKERRQLRKRVKELGRPKKPASAFLRFIASERINTPQGDKQTYRE 211
            :|:..|  :..|::.::  |....|...:. :.....|:|.:||:.:...||    :...|.:.:
  Rat   381 KERLEENCVHPLEEAMLGCDVDGSRHFSES-RNSSHIKRPMNAFMVWAKDER----RKILQAFPD 440

  Fly   212 WHQKTTAK-----WTRLSDSEKEVYMQE----SRKEMELY--------RKAISVWEEKMIRLG 257
            .|..:.:|     |..:::.||:.|.:|    ||:.:|.|        .|...|.|.:.:|:|
  Rat   441 MHNSSISKILGSRWKSMTNQEKQPYYEEQARLSRQHLEKYPDYKYKPRPKRTCVVEGRRLRVG 503

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
TFAM	NP_732527.1	HMGB-UBF_HMG-box	78..142	CDD:238686	15/68 (22%)
		HMGB-UBF_HMG-box	183..247	CDD:238686	19/80 (24%)
Sox13	XP_006249824.1	Herpes_UL46	<251..>419	CDD:355696	38/168 (23%)
		SOX-TCF_HMG-box	415..486	CDD:238684	18/74 (24%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910