Sequence 1: | NP_732527.1 | Gene: | TFAM / 42433 | FlyBaseID: | FBgn0038805 | Length: | 284 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_038945039.1 | Gene: | Hmgb1 / 25459 | RGDID: | 2802 | Length: | 486 | Species: | Rattus norvegicus |
Alignment Length: | 263 | Identity: | 58/263 - (22%) |
---|---|---|---|
Similarity: | 97/263 - (36%) | Gaps: | 55/263 - (20%) |
- Green bases have known domain annotations that are detailed below.
Fly 28 KDWPPSDPSRANDTDHRPLTPPRPLAAASISNTPAVPSKTLEEQL----GLPPRPKKPLTPYFRF 88
Fly 89 MREQRPKLKAANP--QITTVEVVRQLSKNWSDADAQLKERLQAEFKRDQQIYVEERTKYDATLTE 151
Fly 152 EQRAEIKQLKQDLVDAKERRQLRKRVKELGRPKKPASAFLRF-------IASERINTPQGDKQTY 209
Fly 210 REWHQKTTAKWTRLSDSEKEVYMQESRKEMELYRKAISVWEEKMIRLGHIDVVRHGNLIDPPEPK 274
Fly 275 PRK 277 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
TFAM | NP_732527.1 | HMGB-UBF_HMG-box | 78..142 | CDD:238686 | 14/65 (22%) |
HMGB-UBF_HMG-box | 183..247 | CDD:238686 | 19/70 (27%) | ||
Hmgb1 | XP_038945039.1 | HMG_box_2 | 277..349 | CDD:401091 | 16/71 (23%) |
HMG_box | 366..433 | CDD:395407 | 20/72 (28%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D1641977at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR48112 |
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 3.020 |