Protein Alignment TFAM and cmb1

DIOPT Version :9

• Sequence 1: NP_732527.1
• Gene: TFAM / 42433
• FlyBaseID: FBgn0038805
• Length: 284
• Species: Drosophila melanogaster
• Sequence 2: NP_593693.1
• Gene: cmb1 / 2543595
• PomBaseID: SPAC4G9.11c
• Length: 223
• Species: Schizosaccharomyces pombe
• Alignment Length: 189
• Identity: 45/189 - (23%)
• Similarity: 81/189 - (42%)
• Gaps: 41/189 - (21%)

  Fly    74 LPPRPKKPLTPYFRFMREQRPKLKAANPQITTVEVVRQLSKN-WSDADAQLKERLQAEFKRDQQI 137
            :|||.|       ....:...:.|.|.......|::||..|. .:|...:.|.:||.:|..:::.
pombe    50 IPPRLK-------TIWNQMLVETKGAGNGPERFEMIRQKYKALTADEIQKYKNKLQEQFDAEKKR 107

  Fly   138 YVEERTKYDATLTEEQRAEIKQLKQDLVDAKERRQLRK---------RVKELGRPKKPASAFLRF 193
            ::|  |....|.||             :|::.||:.::         |::....||||:|||:.|
pombe   108 FME--TLRSFTPTE-------------IDSENRRRSKEAHSTGSRYYRLRHPDVPKKPSSAFILF 157

  Fly   194 IASERINTPQGDKQ--------TYREWHQKTTAKWTRLSDSEKEVYMQESRKEMELYRK 244
            ....| |.|:..::        |..|..|..:..|..|::.:|:.::.:|:...|.|.|
pombe   158 YKELR-NNPKLRQELGIPEAISTLVEETQNASKAWKELAEDKKKPFIDKSKALKEQYDK 215

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
TFAM	NP_732527.1	HMGB-UBF_HMG-box	78..142	CDD:238686	13/64 (20%)
		HMGB-UBF_HMG-box	183..247	CDD:238686	21/70 (30%)
cmb1	NP_593693.1	NHP6B	1..220	CDD:227935	45/189 (24%)
		HMGB-UBF_HMG-box	147..218	CDD:238686	21/70 (30%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG5648
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR48112
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	2.000