Protein Alignment TFAM and nhp6

DIOPT Version :9

• Sequence 1: NP_732527.1
• Gene: TFAM / 42433
• FlyBaseID: FBgn0038805
• Length: 284
• Species: Drosophila melanogaster
• Sequence 2: NP_593314.1
• Gene: nhp6 / 2542878
• PomBaseID: SPAC57A10.09c
• Length: 108
• Species: Schizosaccharomyces pombe
• Alignment Length: 80
• Identity: 22/80 - (27%)
• Similarity: 41/80 - (51%)
• Gaps: 0/80 - (0%)

  Fly    75 PPRPKKPLTPYFRFMREQRPKLKAANPQITTVEVVRQLSKNWSDADAQLKERLQAEFKRDQQIYV 139
            |..||:.::.:..|..|.|.|:|..||..|..::...|.|.|.:..:..:|..:.:.::|::.|.
pombe    13 PNTPKRNMSAFMFFSIENREKMKTDNPDATFGQLGSLLGKRWKELTSTEREPYEEKARQDKERYE 77

  Fly   140 EERTKYDATLTEEQR 154
            .||.:||..|...::
pombe    78 RERKEYDTKLANGEK 92

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
TFAM	NP_732527.1	HMGB-UBF_HMG-box	78..142	CDD:238686	16/63 (25%)
		HMGB-UBF_HMG-box	183..247	CDD:238686
nhp6	NP_593314.1	NHP6B	<7..>108	CDD:227935	22/80 (28%)
		HMGB-UBF_HMG-box	16..81	CDD:238686	17/64 (27%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG5648
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR48112
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	2.000