Protein Alignment TFAM and B0238.11

DIOPT Version :9

• Sequence 1: NP_732527.1
• Gene: TFAM / 42433
• FlyBaseID: FBgn0038805
• Length: 284
• Species: Drosophila melanogaster
• Sequence 2: NP_504410.1
• Gene: B0238.11 / 178915
• WormBaseID: WBGene00015075
• Length: 317
• Species: Caenorhabditis elegans
• Alignment Length: 202
• Identity: 46/202 - (22%)
• Similarity: 76/202 - (37%)
• Gaps: 42/202 - (20%)

  Fly    53 AAASISNTPAVPSKTLEEQLGLPPRPKKPLTPYFRFMREQ--------RPKLKAANPQITTVEVV 109
            :.|:|| |.....|:|.|...:|.||...:..|.:  :.|        .|...|........|..
 Worm   142 SCAAIS-TYLNSEKSLVEYKSMPDRPPTKIQLYIK--KHQIMLKGIGGEPMKNAYKAMNADTEGA 203

  Fly   110 RQLSKNWSDADAQLKERLQAEFKRDQQIYVEERTKYDATLTEEQRAEIKQLKQDLVDAKERRQLR 174
            ::|.:...:|..|...:||            |.......|||||:..|....:.|......:::.
 Worm   204 KELDELLREASLQYIPQLQ------------EFLDTHPNLTEEQKRSIVNKMKMLNKKYNSKEIS 256

  Fly   175 KRVKELGRPKKPASAFLRFIASERINTPQGDKQTYREWHQKTTAKWTRLSDSEKEVYMQESRKEM 239
            ...|:....|.|.:||..|..:      :.||  ||:           |||.|:|:.:|:..:::
 Worm   257 STPKKRSSKKDPETAFSLFCRT------KNDK--YRD-----------LSDEEREIKLQKKFEKL 302

  Fly   240 ELYRKAI 246
            ...:|.|
 Worm   303 PAAQKDI 309

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
TFAM	NP_732527.1	HMGB-UBF_HMG-box	78..142	CDD:238686	11/71 (15%)
		HMGB-UBF_HMG-box	183..247	CDD:238686	17/64 (27%)
B0238.11	NP_504410.1	None

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG5648
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.900