Protein Alignment TFAM and hmg-5

DIOPT Version :9

• Sequence 1: NP_732527.1
• Gene: TFAM / 42433
• FlyBaseID: FBgn0038805
• Length: 284
• Species: Drosophila melanogaster
• Sequence 2: NP_501245.1
• Gene: hmg-5 / 177543
• WormBaseID: WBGene00001975
• Length: 204
• Species: Caenorhabditis elegans
• Alignment Length: 216
• Identity: 58/216 - (26%)
• Similarity: 89/216 - (41%)
• Gaps: 51/216 - (23%)

  Fly    49 PRPLAAASISNTPAVPSKTLEEQLGLPPRPKKPLTPYFRFMREQRPKLKAANPQITTVEVVRQLS 113
            ||...|||   ||.||       ||:      .:.||..|::|   ..||....:...:::::||
 Worm    17 PRASVAAS---TPQVP-------LGM------NINPYAMFIKE---NFKANTSDMKRTDLMKELS 62

  Fly   114 KNWSDADAQLKERLQAEFKRDQQIYVEERTKYDA--------TLTEEQRAEIKQLKQDLVD---- 166
            ..|.......|::           |.|....|:|        ..||||:..:...|:...:
 Worm    63 GKWKALSISEKDK-----------YTELSKNYNAQKLDDFMKLSTEEQKKLVDSAKEKKAERASR 116

  Fly   167 --AKERRQLRKRVKELGRPKKPASAFLRFIASERINTPQGDKQTYREWHQKTTAKWTRLSDSEKE 229
              |||||:.|   |:.|||..|.||:..||..:........|:..:|    ..|:|...:||:|:
 Worm   117 RHAKERREKR---KQSGRPSVPPSAYALFIKEKLSGAGMESKEKMKE----AVAQWKAFTDSQKK 174

  Fly   230 VYMQESRKEMELYRKAISVWE 250
            .|..|::|..:.|...:..||
 Worm   175 KYTDEAKKLKDEYHVVLQKWE 195

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
TFAM	NP_732527.1	HMGB-UBF_HMG-box	78..142	CDD:238686	12/63 (19%)
		HMGB-UBF_HMG-box	183..247	CDD:238686	17/63 (27%)
hmg-5	NP_501245.1	NHP6B	<37..187	CDD:227935	43/170 (25%)
		HMGB-UBF_HMG-box	132..192	CDD:238686	17/63 (27%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG5648
Hieranoid	1	1.000	-	-
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	63	1.000	Inparanoid score	I3979
Isobase	0	0.000	Not matched by this tool.
OMA	1	1.010	-	-		QHG49431
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0007031
OrthoInspector	1	1.000	-	-		oto18509
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR48112
Phylome	1	0.910	-	-
RoundUp	1	1.030	-	avgDist	Average_Evolutionary_Distance	R14311
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	9	9.000