Protein Alignment TFAM and hmg-1.1

DIOPT Version :9

• Sequence 1: NP_732527.1
• Gene: TFAM / 42433
• FlyBaseID: FBgn0038805
• Length: 284
• Species: Drosophila melanogaster
• Sequence 2: NP_001370073.1
• Gene: hmg-1.1 / 175081
• WormBaseID: WBGene00001971
• Length: 95
• Species: Caenorhabditis elegans
• Alignment Length: 82
• Identity: 15/82 - (18%)
• Similarity: 40/82 - (48%)
• Gaps: 11/82 - (13%)

  Fly    75 PPRPKKPLTPYFRFMREQRPKLKAANPQITTVEVVRQLSKNWSDADAQLKERLQAEFKRDQQIYV 139
            |..||:.::.:|.:|:|.|.::|  .|.:...:|.:.....|    .:|.::.:.|.|.     .
 Worm    25 PNAPKRAMSAFFFWMQENRERIK--KPGMGVADVAKAAGVEW----GKLTDKSRWEKKA-----A 78

  Fly   140 EERTKYDATLTEEQRAE 156
            :::.:|:..:...::::
 Worm    79 DDKKRYEVDIANYKKSQ 95

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
TFAM	NP_732527.1	HMGB-UBF_HMG-box	78..142	CDD:238686	13/63 (21%)
		HMGB-UBF_HMG-box	183..247	CDD:238686
hmg-1.1	NP_001370073.1	HMGB-UBF_HMG-box	28..89	CDD:238686	14/71 (20%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG5648
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1641977at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.910