Protein Alignment TFAM and tfam

DIOPT Version :10

• Sequence 1: NP_732527.1
• Gene: TFAM / 42433
• FlyBaseID: FBgn0038805
• Length: 284
• Species: Drosophila melanogaster
• Sequence 2: XP_002937148.2
• Gene: tfam / 100135718
• XenbaseID: XB-GENE-978256
• Length: 281
• Species: Xenopus tropicalis
• Alignment Length: 187
• Identity: 57/187 - (30%)
• Similarity: 93/187 - (49%)
• Gaps: 5/187 - (2%)

  Fly    78 PKKPLTPYFRFMREQRPKLKAANPQITTVEVVRQLSKNWSDADAQLKERLQAEFKRDQQIYVEER 142
            ||:|||.|.|:..||||||....|:...:::.:.::..|....:..|||.:.....:|:.|.||.
 Frog    55 PKRPLTAYLRYSIEQRPKLHKQYPEAKMMDLTKIIALEWKGLPSAEKERYEVVANAEQKKYREEV 119

  Fly   143 TKYDATLTEEQ-RAEIKQLKQDLVDAKERRQLRKRVKELGRPKKPASAFLRFIASERINTPQGDK 206
            .:|...|:..| ....:|.:|.|...|..|: ::.:..|||||:|.|.|..|: ||.....:|..
 Frog   120 KQYREKLSPMQLELHREQRRQRLAKRKSVRK-KRELTVLGRPKRPRSPFNIFM-SEHFQDAKGAS 182

  Fly   207 QTYREWHQKTTAKWTRLSDSEKEVYMQESRKEMELYRKAISVWEEKMIRLGHIDVVR 263
            ...:  .:.....|.||..|:|:.|.|.:..:...|...:..|||:|:.:|..|::|
 Frog   183 SQSK--MKSLRDDWERLHTSQKQTYNQLAEDDKIRYENEMKSWEEQMMEIGRGDLIR 237

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
TFAM	NP_732527.1	HMG-box_SF	78..138	CDD:469606	19/59 (32%)
		HMG-box_SF	168..263	CDD:469606	28/94 (30%)
tfam	XP_002937148.2	HMG-box_SF	55..123	CDD:469606	22/67 (33%)
		HMG-box_TFAM_rpt2	140..239	CDD:438803	31/102 (30%)