DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5191 and AMD2

DIOPT Version :9

Sequence 1:NP_650893.2 Gene:CG5191 / 42431 FlyBaseID:FBgn0038803 Length:552 Species:Drosophila melanogaster
Sequence 2:NP_010528.3 Gene:AMD2 / 851829 SGDID:S000002650 Length:549 Species:Saccharomyces cerevisiae


Alignment Length:540 Identity:120/540 - (22%)
Similarity:197/540 - (36%) Gaps:162/540 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    71 LAKLIRTRKIKSEEVVEAYIERCRQVNPLINAIVQDRFEEALEEAREID-NVIAMGINSVESMEE 134
            |.:.:..:::...|:..|:..|...::.::|.:.:..|.|||..|...| |..|:          
Yeast    66 LRQALEAKELSCHEITAAFCHRAALIHQVVNCLSEIMFSEALRLADYYDSNRPAI---------- 120

  Fly   135 LTPLLGIPVTVKESIAVKGMTNQAG---RVFKTPQIAKSDAPVVEQIKRSGGIILLVSNTPELCL 196
            |.||.|||:::|:...|:|:....|   |.|| |:....::.:|..::..|.||.:.:..|...:
Yeast   121 LPPLYGIPISLKDQCNVEGVDTSLGYLCRTFK-PKTKNEESLIVSFLRDLGAIIFVKTTVPSSMM 184

  Fly   197 LWETYNNVTGQTKNPYDLKRTPGGSSGGEAALLASGASLLGLTSDIGGSSRLPAMFSGIWGHKPT 261
            ..:|.:|..|.|.|..:|..:.|||||||.:|:.:..|||||.:|||||.|:|:.:.|::|.|||
Yeast   185 ATDTQSNTFGYTYNSINLSFSSGGSSGGEGSLIGAHGSLLGLGTDIGGSIRIPSSYQGLFGLKPT 249

  Fly   262 ----PYA---VSFKGHHPTSDFPKWGDFFTIAPMTRYAKDLPLLLKCMSDPTGPKLTLDRPISVN 319
                ||.   .||:|......        .|.|:.|...||...:.|:.:...|.:.     .|.
Yeast   250 FGRVPYLRVDNSFEGRETIPS--------VIGPLARDLSDLRYFMSCVINICQPWVQ-----DVK 301

  Fly   320 GIRFFFMDNDGP------------SGMMRPLSRDLHAAINRVATDFNAKRVNIRKMKWSLDISLS 372
            .|.:.|..:...            .|::.|...|:.|.  :...|...|...::.:||.....||
Yeast   302 CIPYHFDSSTSKLHDNYVVGIWYGDGVIDPPPSDIRAL--KTCEDLVNKTKGMKAVKWEPSSELS 364

  Fly   373 AML--------------TMKNIETIYHK----------TEEGEQPKTV------------CKETV 401
            ..|              .:||...|..:          .|.|..|.||            .::.:
Yeast   365 RELFDLANEADVADSGNEIKNEFEISGEPLLDILKPMVLENGRPPYTVNEWWDLTKRVYNAQQLM 429

  Fly   402 K-YFFGCSDSILPSVIFGHLQNFMKIIPNSRHKHLASIIEALKTEFKEMLGNDGVFLYPTFPNTA 465
            : |:....:|..|.||... ...|...|.          :.|||..:                  
Yeast   430 RDYYLSFPESERPDVIISP-TTLMPFRPG----------DMLKTTLR------------------ 465

  Fly   466 HQHYQIYHKLLEPMYMAIFNTLGLPVTNCMIG---------LDRRN------------------- 502
                          |:.:||.|..|..:..:|         :|..:                   
Yeast   466 --------------YILLFNVLNFPSLSIPVGSVDCQIDGLMDTTSALNPEDKMIKTYWNDLIQS 516

  Fly   503 -----LPMGIQVVANPGQDH 517
                 .|:|:|||:....|:
Yeast   517 GEIDGFPIGLQVVSPTFNDN 536

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5191NP_650893.2 GatA 61..537 CDD:223232 120/540 (22%)
PRK07488 63..537 CDD:236030 120/540 (22%)
AMD2NP_010528.3 Amidase 79..539 CDD:396144 119/527 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 105 1.000 Domainoid score I1462
eggNOG 1 0.900 - - E1_COG0154
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 111 1.000 Inparanoid score I1370
Isobase 1 0.950 - 0.69812 Normalized mean entropy S4795
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm46650
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1914
SonicParanoid 1 1.000 - - X256
TreeFam 00.000 Not matched by this tool.
87.840

Return to query results.
Submit another query.