DRSC/TRiP Functional Genomics Resources

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Protein Alignment DPCoAC and SHS1

DIOPT Version :9

Sequence 1:NP_001287430.1 Gene:DPCoAC / 42429 FlyBaseID:FBgn0067783 Length:365 Species:Drosophila melanogaster
Sequence 2:NP_194966.1 Gene:SHS1 / 829375 AraportID:AT4G32400 Length:392 Species:Arabidopsis thaliana


Alignment Length:370 Identity:111/370 - (30%)
Similarity:178/370 - (48%) Gaps:59/370 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 SSTMTTASATL-SSDLDDA--DTSRTQLSPSETSGVVLVPATTVTPMRQKIDQVVIS-------- 75
            |...|...|:| ||||.:.  ::..|||:...|.         ..|.:::.::||..        
plant    42 SVNQTNPFASLSSSDLSNRGNNSFSTQLNDLYTK---------YMPGKEEEEEVVNGEKRKRKKK 97

  Fly    76 ----------------LISGAAAGALAKTVIAPLDRTKINFQIRNDVPFSFRASLRYLQNTYANE 124
                            |:|||.|||:::||:|||:..:.:..:.:    ...:|.....:...:|
plant    98 GGLTLKIKIANPSLRRLLSGAVAGAVSRTVVAPLETIRTHLMVGS----GGNSSTEVFSDIMKHE 158

  Fly   125 GVLALWRGNSATMARIVPYAAIQFTAHEQWRRILHVDKDGTNTKGRR--------FLAGSLAGIT 181
            |...|:|||...:.|:.|..|::....|.      |:|..:...|:.        .|||:.||::
plant   159 GWTGLFRGNLVNVIRVAPARAVELFVFET------VNKKLSPPHGQESKIPIPASLLAGACAGVS 217

  Fly   182 SQSLTYPLDLARARMAVTDRYTGYRTLRQVFTKIWVEEGPRTLFRGYWATVLGVIPYAGTSFFTY 246
            ...|||||:|.:.|:.:  :...|:.:...|.||..||||..|:||...:::||:|||.|::|.|
plant   218 QTLLTYPLELVKTRLTI--QRGVYKGIFDAFLKIIREEGPTELYRGLAPSLIGVVPYAATNYFAY 280

  Fly   247 ETLKREYYEVVGNNKPNTLVSLAFGAAAGAAGQTASYPLDIVRRRMQTMRVNTAGGDRYPTILET 311
            ::|::.|.......|...:.:|..|:.|||...||::||::.|:.||...|  :|...|..:|..
plant   281 DSLRKAYRSFSKQEKIGNIETLLIGSLAGALSSTATFPLEVARKHMQVGAV--SGRVVYKNMLHA 343

  Fly   312 LVKIYREEGVKNGFYKGLSMNWIKGPIAVGISFSTYDLIKAWLTE 356
            ||.|...||:. |:||||..:.:|...|.||||..|:..|..|.|
plant   344 LVTILEHEGIL-GWYKGLGPSCLKLVPAAGISFMCYEACKKILIE 387

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DPCoACNP_001287430.1 Mito_carr 72..159 CDD:278578 25/110 (23%)
Mito_carr 169..251 CDD:278578 33/89 (37%)
Mito_carr 279..356 CDD:278578 30/76 (39%)
SHS1NP_194966.1 PTZ00169 105..359 CDD:240302 83/268 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0752
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54381
OrthoDB 1 1.010 - - D1253450at2759
OrthoFinder 1 1.000 - - FOG0001300
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24089
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
76.930

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