DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment DPCoAC and F17E5.2

DIOPT Version :9

Sequence 1:NP_001287430.1 Gene:DPCoAC / 42429 FlyBaseID:FBgn0067783 Length:365 Species:Drosophila melanogaster
Sequence 2:NP_510081.3 Gene:F17E5.2 / 181399 WormBaseID:WBGene00008924 Length:531 Species:Caenorhabditis elegans


Alignment Length:376 Identity:107/376 - (28%)
Similarity:184/376 - (48%) Gaps:45/376 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 IKSTGSQLSSTMTTASA-TLSSDLDDADTSRTQLSPSETSGVVLVPATTVTPMRQKID------- 70
            |||...::...:....| ::...:|.:.:|...|:..: ..::|.|:   |.||..:|       
 Worm   161 IKSYCKEMGVNLDDQKAMSIVKKMDQSGSSSVNLNEFQ-DFMLLYPS---TDMRDMVDFWRHNLI 221

  Fly    71 ---------------QVVIS------LISGAAAGALAKTVIAPLDRTKINFQIRNDVPFSFRASL 114
                           |.::|      |::|..|||:::|..||.||.|:..|: |....:....:
 Worm   222 IDIGEDGQVPEDFTPQELLSGVWWRHLVAGGVAGAMSRTCTAPFDRIKVYLQV-NSTKTNKLGVV 285

  Fly   115 RYLQNTYANEGVLALWRGNSATMARIVPYAAIQFTAHEQWRRILHVDKDGTNTKG-RRFLAGSLA 178
            ..:...:|..|:.:.||||...:.:|.|.:|::|..::|.:|.:...|.|..... .|.||||.|
 Worm   286 SCVHLLHAEGGIKSFWRGNGINVIKIAPESAMKFMCYDQIKRWMQEYKGGAELSTIERLLAGSSA 350

  Fly   179 GITSQSLTYPLDLARARMAVTDRYTGY--RTLRQVFTKIWVEEGPRTLFRGYWATVLGVIPYAGT 241
            |..||:..||:::.:.|:|:  |.||.  :.:.....|::.:||.:..::||...:||:|||||.
 Worm   351 GAISQTAIYPMEVMKTRLAL--RRTGQLDKGMFHFAHKMYTKEGIKCFYKGYLPNLLGIIPYAGI 413

  Fly   242 SFFTYETLK---REYYEVVGNNKPNTLVSLAFGAAAGAAGQTASYPLDIVRRRMQTMRVNTAGGD 303
            ....||:||   .:||  ..:.:|..|..||.|..:...||.|||||.:||.|:|...::.....
 Worm   414 DLTVYESLKSMYTKYY--TEHTEPGVLALLACGTCSSTCGQLASYPLALVRTRLQARAISPKNST 476

  Fly   304 RYPTILETLVKIYREEGVKNGFYKGLSMNWIKGPIAVGISFSTYDLIKAWL 354
            :..|::.....|.:.||. .|.|:|::.|::|...||.||:..|:.::..|
 Worm   477 QPDTMVGQFKHILQTEGF-TGLYRGITPNFMKVIPAVSISYVVYEKVRKQL 526

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DPCoACNP_001287430.1 Mito_carr 72..159 CDD:278578 26/92 (28%)
Mito_carr 169..251 CDD:278578 32/87 (37%)
Mito_carr 279..356 CDD:278578 25/76 (33%)
F17E5.2NP_510081.3 FRQ1 67..206 CDD:227455 8/45 (18%)
EFh 74..160 CDD:298682
EFh 140..201 CDD:238008 7/40 (18%)
Mito_carr 244..333 CDD:278578 25/89 (28%)
PTZ00169 249..526 CDD:240302 90/282 (32%)
Mito_carr 337..429 CDD:278578 32/93 (34%)
Mito_carr 434..527 CDD:278578 31/94 (33%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1887
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.940

Return to query results.
Submit another query.