DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Stat92E and stat1

DIOPT Version :9

Sequence 1:NP_001262760.1 Gene:Stat92E / 42428 FlyBaseID:FBgn0016917 Length:818 Species:Drosophila melanogaster
Sequence 2:XP_012826050.2 Gene:stat1 / 780397 XenbaseID:XB-GENE-482166 Length:751 Species:Xenopus tropicalis


Alignment Length:798 Identity:210/798 - (26%)
Similarity:351/798 - (43%) Gaps:159/798 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSLWKRISSHVDCE--QRMAAYYEEKGMLELRLCLAPWIEDR-------------IMSEQITPNT 50
            |:.|..: ..:|.:  :::...|::...:|:|..||.|:|.:             |:...:....
 Frog     1 MAQWYEL-QQIDTKFLEQVHQLYDDSFPMEIRQYLAQWLESQDWEHAANNVSLATILFHGLLSQL 64

  Fly    51 TDQLERVALKFNEDLQQKLLSTRTASDQALKFRVVELCALIQRISAVELYTHLRSGLQKELQLVT 115
            .||..|.:|:.|..||..:..::.......:...|::..:|            .|.|::|.::: 
 Frog    65 DDQYSRFSLENNFLLQHNIRKSKRNLQDHFQEDPVQMAMII------------NSCLREESKIL- 116

  Fly   116 EKSVAATAGQSMPLNPYNMNNTPMVTGYMVDPSDLLAVSNSCNPPVVQGIGPIHNVQNTGIASPA 180
                    |.:...|...:.:|.  |..|:|....|...             :.:|:|..:.   
 Frog   117 --------GNARAYNKNQVGSTQ--TTVMLDKQKELDKK-------------VTDVRNRALE--- 155

  Fly   181 LGMVTPKVEL-------YEVQHQIMQSL-NEFGNCA-NALK----LLAQNYSYMLNSTSSPNAEA 232
               |...|:|       |:.:::.:||. ||....| |.||    ||:..:.::|          
 Frog   156 ---VEQDVKLLEDLQDEYDFKYKTVQSRENEHNGLAQNELKKEKMLLSNMHIHVL---------- 207

  Fly   233 AYRSLIDEKAAIVLTMRRSFMYYESLHEMVIHELKNWRHQQAQAGNGAPFNEGSLDDIQRCFEML 297
            ..|..|..|.|.::::..     .:.:.::..||..|:|:|..|..|.|.| ..||.:|..|   
 Frog   208 LKRKAIIHKIAELMSVTD-----HTQNALINEELVEWKHRQQIACIGGPPN-ACLDQLQSWF--- 263

  Fly   298 ESFIAHMLAAVKELMRVRLVTEEPELTH-----------LLEQVQNAQKNLVCSAFIVDKQP--- 348
             :.||..|..|::.:: :|...|.:||:           |.|:.|:..|.|:.|:|:|::||   
 Frog   264 -TTIAKSLQQVRQQLK-KLEELEQKLTYDGDPITCNKQALQERTQSLFKQLLQSSFVVERQPCMP 326

  Fly   349 -----PQVMKTNTRFAASVRWLIGSQLGIHNNPPTVECIIMSEIQSQRFVTRNTQMDNSSLSGQS 408
                 |.|:||..:|...:|.|:  :|...|....|:.:...::..:..|....:.   ::.|..
 Frog   327 THPQRPLVLKTGVQFTVKLRLLV--KLQELNYQLKVKALFDKDVNDKNIVKGFRKF---NILGTH 386

  Fly   409 SGEIQNASSTMEYQQNNHVFSASFRNMQLKKIKRAEKKGTES---VMDEKFALFFYTTTTVNDFQ 470
            : ::.|    || :..|...:|.||::|||:.|.|..:..|.   |.:|...|.|.|........
 Frog   387 T-KVMN----ME-ESTNGSLAAEFRHLQLKEQKNAGSRTNEGPLIVTEELHCLSFETQLCQLGLV 445

  Fly   471 IRVWTLSLPVVVIVHGNQEPQSWATITWDNAFAEIVRDP--FMITDRVTWAQLSVALNIKFGSCT 533
            :.:.|.|||:|||.:.:|.|..||:|.|.|......::.  |:......|..||..|:.:|.|.|
 Frog   446 VDLETSSLPIVVISNVSQLPSGWASILWYNMLTSETKNVSFFLNPPAARWPLLSDVLSWQFSSVT 510

  Fly   534 GRSLTIDNLDFLYEKLQREERS---EYITWNQFCKEPMPDRSFTFWEWFFAIMKLTKDHMLGMWK 595
            .|.|..|.|..|.|||.....|   :.|.|.:||||.|.|::|.||.|...|::|.|.|:|.:|.
 Frog   511 KRGLNADQLSMLGEKLLGPTTSSGDDLIPWTRFCKENMNDKNFPFWLWIEGILELIKKHLLCLWN 575

  Fly   596 AGCIMGFINKTKAQTDLLRSVYGIGTFLLRFSD-SELGGVTIAYV---NENGLVTMLAPWTARDF 656
            .|.|:|||:|.:.:. ||:. ...||||||||: |:.|.:|..:|   ..:.|...:.|:|.|:.
 Frog   576 DGFIVGFISKERERA-LLKE-KAPGTFLLRFSESSKEGAITFTWVERPQNDPLFHSVEPYTKREL 638

  Fly   657 QVLNLADRIRDLDVLC----------WLHPSDRNASPVKRDVAFGEFYSKRQE-PEPLVLD--PV 708
            ..:...|.||:..|:.          :|:|.      ..:|.|||::||:.:| .||:.||  ..
 Frog   639 SAVTFPDIIRNYKVMAAENIPENPLRFLYPD------TPKDNAFGKYYSRPKEADEPMDLDGPKG 697

  Fly   709 TGYVKSTL----HVHVCR 722
            |||:|:.|    .||..|
 Frog   698 TGYIKTELISVSEVHPSR 715

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Stat92ENP_001262760.1 STAT_int 2..119 CDD:214942 22/131 (17%)
STAT_alpha 151..340 CDD:279369 48/212 (23%)
STAT_bind 342..587 CDD:280939 79/260 (30%)
SH2_STAT_family 578..696 CDD:198175 42/131 (32%)
stat1XP_012826050.2 STAT_int 2..119 CDD:214942 23/138 (17%)
STAT1_CCD 138..313 CDD:341076 47/214 (22%)
STAT1_DBD 317..477 CDD:341083 48/170 (28%)
SH2 558..706 CDD:417686 52/155 (34%)
STAT1_TAZ2bind 714..738 CDD:371931 1/2 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D166575at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11801
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
44.020

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