DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Stat92E and Stat6

DIOPT Version :9

Sequence 1:NP_001262760.1 Gene:Stat92E / 42428 FlyBaseID:FBgn0016917 Length:818 Species:Drosophila melanogaster
Sequence 2:NP_001037715.1 Gene:Stat6 / 362896 RGDID:1309063 Length:841 Species:Rattus norvegicus


Alignment Length:830 Identity:253/830 - (30%)
Similarity:383/830 - (46%) Gaps:188/830 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSLWKRISS---------HVDCEQRMAAYYEEKGMLELRLCLAPWIEDRIMSEQITPNTTDQLER 56
            ||||..:|.         :||..|            .||..||.|:|::.....:..:.      
  Rat     1 MSLWSLVSKMSPEKLQRLYVDFPQ------------HLRHLLAEWLENQPWEFLVGSDA------ 47

  Fly    57 VALKFNEDLQQKLLSTRTASDQALKFRVVELCALIQRISAVE---------LYTHLRSGLQKELQ 112
                |..::...|||......||......:..:|:|.||.:|         |...:|..||.|.:
  Rat    48 ----FCYNMASALLSATVQRLQASAGEQGKGSSLLQHISTLESIYQRDPLKLVATIRQILQGEKK 108

  Fly   113 LVTEKSVAATAGQSMPLNPYNMNNTPMVTGYMVDPSDLLAVSNSCNPPVVQGIGPIHNVQNTGIA 177
            .|.|:                .::.|                           ||.|..|.....
  Rat   109 AVIEE----------------FHHLP---------------------------GPFHRKQEELKF 130

  Fly   178 SPALGMVTPKVELYEVQHQIMQSLNEFGNCANALKLLAQNYSYMLNSTSSPNAEAAYRSLIDEKA 242
            :.|||         .:||::.::           ::|.::.     ...:..|:.:.::|||..|
  Rat   131 TTALG---------RLQHRVRET-----------RILRESL-----QQGTKTAQVSLKNLIDPPA 170

  Fly   243 -------AIVLTMRRSFMYYESLHEMVIHELKNWRHQQAQAGNGAPFNEGSLDDIQ-RCFEMLES 299
                   .:...::.:....|:...:|:..::.|:.||..||||.||.| ||..:| ||..::|.
  Rat   171 NGTGPSEDLATMLQGTVGDLEATQALVLKRIQIWKRQQQLAGNGTPFEE-SLAGLQERCESLVEI 234

  Fly   300 FI---AHMLAAVKELMRVRLVTEEPEL-THLLEQVQNAQKNLVCSAFIVDKQPPQVMKTNTRFAA 360
            :.   ..:.||..||        ||:. ..|:.::....:.||.|:|:|:||||||:||.|:|.|
  Rat   235 YSQLQQEIGAASGEL--------EPKTRASLISRLDEVLRTLVTSSFLVEKQPPQVLKTQTKFQA 291

  Fly   361 SVRWLIGSQ-LGIHNNPPTVECIIMSEIQSQRFVTRNTQMDNSSLSG-QSSGEIQNASSTMEYQQ 423
            .||:|:|.| ||....||.|...:::|.|:     |...:...|.:| :|:|||.|.:..:|...
  Rat   292 GVRFLLGLQFLGTSAKPPLVRADMVTEKQA-----RELSLPQGSGAGVESTGEIMNNTVPLENSV 351

  Fly   424 NNHVFSASFRNMQLKKIKRAEKKGTESVMDEKFALFFYTTTTV--NDFQIRVWTLSLPVVVIVHG 486
            ..:..||.|:|:.||||||.|:||||||.:||.|:.|.|:..:  |...|::..||||:||||||
  Rat   352 PGNCCSALFKNLLLKKIKRCERKGTESVTEEKCAVLFSTSFMLGPNKHLIQLQALSLPLVVIVHG 416

  Fly   487 NQEPQSWATITWDNAFAEIVRDPFMITDRVTWAQLSVALNIKFGS--CTGRSLTIDNLDFLYEKL 549
            ||:..:.|||.|||||:|:.|.||::.:||.|.::...||:||.:  .|.|.|..::..||.:|:
  Rat   417 NQDNNAKATILWDNAFSEMDRVPFVVAERVPWEKMCETLNLKFMAEVGTSRGLLPEHFLFLAQKI 481

  Fly   550 QREE-------RSEYITWNQFCKEPMPDRSFTFWEWFFAIMKLTKDHMLGMWKAGCIMGFINKTK 607
            ..:.       :...::|:||.||.:..|.||||:||..::.|||..:...|....|:|||:|..
  Rat   482 FNDNSLSIEAFQHRCVSWSQFNKEILLGRGFTFWQWFDGVLDLTKRCLRSYWSDRLIIGFISKQY 546

  Fly   608 AQTDLLRSVYGIGTFLLRFSDSELGGVTIAYV----NENGLVTMLAPWTARDFQVLNLADRIRDL 668
            ..:.||..  ..|||||||||||:||:|||:|    :.:..:..:.|::|:|..:.:|.||||||
  Rat   547 VTSLLLNE--PDGTFLLRFSDSEIGGITIAHVIRGQDGSSQIENIQPFSAKDLSIRSLGDRIRDL 609

  Fly   669 DVLCWLHPSDRNASPVK-RDVAFGEFYSKRQEPEPLVLDPVTGYVKSTLHVHVCRNGENGSTSGT 732
            ..|       :|..|.| :|.||...|    :||.:..|. .|||.:|:.:.|    |......|
  Rat   610 AQL-------KNLYPKKPKDEAFRSHY----KPEQMGKDG-RGYVSTTIKMTV----ERDQPLPT 658

  Fly   733 PH--------------HAQESMQLGN---ISPQS-GITFYSPARLEESDS 764
            |.              ....||||.:   ..||| .|..:....||||.|
  Rat   659 PEPQMPAMVAPYDLGMAPDASMQLSSDMVYPPQSHSIHSFQSIPLEESMS 708

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Stat92ENP_001262760.1 STAT_int 2..119 CDD:214942 31/134 (23%)
STAT_alpha 151..340 CDD:279369 42/200 (21%)
STAT_bind 342..587 CDD:280939 108/257 (42%)
SH2_STAT_family 578..696 CDD:198175 48/122 (39%)
Stat6NP_001037715.1 STAT_int 2..115 CDD:214942 31/150 (21%)
STAT_alpha <178..271 CDD:279369 27/101 (27%)
STAT_bind 273..526 CDD:280939 108/257 (42%)
SH2_STAT6 517..646 CDD:198240 54/142 (38%)
STAT6_C 655..841 CDD:291272 15/54 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166340135
Domainoid 1 1.000 102 1.000 Domainoid score I6670
eggNOG 1 0.900 - - E1_KOG3667
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 312 1.000 Inparanoid score I2506
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D166575at33208
OrthoFinder 1 1.000 - - FOG0001643
OrthoInspector 1 1.000 - - otm44930
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11801
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X1200
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1211.860

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