DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment MFS9 and vglu-3

DIOPT Version :9

Sequence 1:NP_650889.1 Gene:MFS9 / 42426 FlyBaseID:FBgn0038799 Length:502 Species:Drosophila melanogaster
Sequence 2:NP_499277.1 Gene:vglu-3 / 176442 WormBaseID:WBGene00011556 Length:544 Species:Caenorhabditis elegans


Alignment Length:480 Identity:159/480 - (33%)
Similarity:255/480 - (53%) Gaps:26/480 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 SPKNGKHLEQVHQNNNEITESEPLTWRFWRKQRYIVVLLAFFGFFNVYSLRVNLSVAIVAMTENR 70
            |.|..:|.||:    ..|||.:..   |.||.|:.:.:||.|||...:.:|.|..||...|..|.
 Worm    22 SRKTWEHKEQL----QTITEQKKF---FLRKVRWQIAILAHFGFAISFGIRSNFGVAKNRMVNNF 79

  Fly    71 TVFDADGNVSYQQDFPWDSKQKGLILSSFFYGYILTQFLGGYIGTKIGGNIVFGTGIGSTAILTL 135
            |  ||.|.| ::::|.|...:.|::.|||||||..:|...|.:..|...|.:|..||...:.:.:
 Worm    80 T--DAYGEV-HEREFLWTGAEVGMMESSFFYGYAASQIPAGVLAAKFAPNKIFMLGILVASFMNI 141

  Fly   136 LTPMAASHSLEMFLFVRI---IEGFFEGVTFPGIHAVWARWSPPLERSRMASIAFAGNYAGTVVA 197
            |:.::.:......:||.:   ::|...||.:|.:|.||..|:||||||::|:.||.|:..|.:..
 Worm   142 LSAISFNFHPYTDIFVMVVQAVQGLALGVLYPAMHGVWKFWAPPLERSKLATTAFTGSSVGVMTG 206

  Fly   198 MPCSGFLATKYGWESVFYVFGTIGVIWYITWLVFVKAGPELDRFCSKEECDYIQKTIGYVGSKHV 262
            :|.|.:|.:.:.|.:.|||||.:|:||.:.|:......||...:.|.:|...:.:.||.|..|::
 Worm   207 LPASAYLVSHFSWSTPFYVFGVVGIIWSLIWMYVSSHSPETHGYISDDEKKQVTEKIGDVAVKNM 271

  Fly   263 K---HPWRAIFTSMPFYAIMASHFSENWGFYTLLTQLPSFLRDTLNFDLGKTGILSAVPYLAMGI 324
            .   .|||.:.||...:||:...|..:|||:.||....::::|.|:.|:..:|.:|..|...|.|
 Worm   272 SLTTLPWRDMMTSSAVWAIIICTFCRSWGFFLLLGNQLTYMKDVLHIDIKNSGFISIFPQFGMCI 336

  Fly   325 LLAVSGYLADWLQVKGIWTTTQVRRNFNCGAFLAQTVFMMLTAYLLDPTWSVVSLTIAVGLGAFA 389
            :...:|.|.|:|:..|..:|..||::.|...|..:.:.:...|::.||..:|..|.||.......
 Worm   337 VTLATGQLCDYLRSSGKMSTEAVRKSVNTFGFTVEAMMLGCLAFVRDPVIAVTCLVIACTGSGSV 401

  Fly   390 WSGFAVNHLDIAPQHASVLMGIGNTFATIPGIVSPLLTGYVVTN----QTSDEWRIIFFISAGIY 450
            .|||.|||.||||::|.:||||.|....:.|:      |.:|||    |..|.|:.:|.::..|.
 Worm   402 LSGFNVNHFDIAPRYAPILMGIANGLGAVAGV------GGMVTNTVTYQNPDGWKWVFLLAMAID 460

  Fly   451 LVGCVIYWFYCSGDLQEWAKTPEQK 475
            :.|.:.:..:..||:..||:.||::
 Worm   461 IFGVIFFLIFAKGDVLPWAREPEKE 485

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MFS9NP_650889.1 2A0114euk 38..477 CDD:129972 148/448 (33%)
MFS 42..460 CDD:119392 141/427 (33%)
vglu-3NP_499277.1 2A0114euk 47..485 CDD:129972 148/446 (33%)
MFS 52..471 CDD:119392 141/427 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2532
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D144672at33208
OrthoFinder 1 1.000 - - FOG0000034
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X201
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.820

Return to query results.
Submit another query.