DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Or92a and Or56a

DIOPT Version :10

Sequence 1:NP_524414.2 Gene:Or92a / 42425 FlyBaseID:FBgn0038798 Length:408 Species:Drosophila melanogaster
Sequence 2:NP_523796.2 Gene:Or56a / 37269 FlyBaseID:FBgn0034473 Length:419 Species:Drosophila melanogaster


Alignment Length:377 Identity:72/377 - (19%)
Similarity:140/377 - (37%) Gaps:89/377 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    84 ATAVAPCIGFSFMADFKQFGLTVNRKRLVRLL----DDLKEIFPLDLEAQRKYNVSFYRKHMNRV 144
            ||:.|..:.: |......|...|.|.:::.||    .|::.:..   ||.            ||.
  Fly    76 ATSYATAVQY-FAVSIAMFNAYVQRDKVISLLRVAHSDIQNLMH---EAD------------NRE 124

  Fly   145 MTLFTILCMTYTSSFSFYPAIKSTIKYYLMGSEIFERNY-----GFHI---------------LF 189
            |.|. :....||.:.:....|.|.|...:..|:...|:.     .|::               ||
  Fly   125 MELL-VATQAYTRTITLLIWIPSVIAGLMAYSDCIYRSLFLPKSVFNVPAVRRGEEHPILLFQLF 188

  Fly   190 PYDAETD-LTVYWFSYWGLAHCAYVAGVSYVCVDLLLIATITQLTMHFNFIANDLEAYEGGDHTD 253
            |:....| ..|.:...|      |..|:....:. |....||.|..:.|.....|     ....:
  Fly   189 PFGELCDNFVVGYLGPW------YALGLGITAIP-LWHTFITCLMKYVNLKLQIL-----NKRVE 241

  Fly   254 EENIKYLHN-LVVYHARALDLS---------------------EEVNNIFSFLILWNFIAASLVI 296
            |.:|..|:: ||:....|.:|:                     :|:..:....::.:||..|::|
  Fly   242 EMDITRLNSKLVIGRLTASELTFWQMQLFKEFVKEQLRIRKFVQELQYLICVPVMADFIIFSVLI 306

  Fly   297 CFAGFQITASNVEDIVLYFIFFSASLVQVFVVC-------YYGDEMISSSSRIGHSAFNQNWLPC 354
            ||..|.:|......:..:|:|     :.:||:.       ::...::.....:..:.|:..|...
  Fly   307 CFLFFALTVGVPSKMDYFFMF-----IYLFVMAGILWIYHWHATLIVECHDELSLAYFSCGWYNF 366

  Fly   355 STKYKRILQFIIARSQKPASIRPPTFPPISFNTFMKVISMSYQFFALLRTTY 406
            ....:::|.|::..:|:|..:| .....::..||:.:...:|.:|.|||:::
  Fly   367 EMPLQKMLVFMMMHAQRPMKMR-ALLVDLNLRTFIDIGRGAYSYFNLLRSSH 417

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Or92aNP_524414.2 7tm_6 80..396 CDD:251636 67/365 (18%)
Or56aNP_523796.2 7tm_6 126..407 CDD:251636 52/299 (17%)

Return to query results.
Submit another query.