DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4335 and Tmlhe

DIOPT Version :9

Sequence 1:NP_650886.1 Gene:CG4335 / 42421 FlyBaseID:FBgn0038795 Length:364 Species:Drosophila melanogaster
Sequence 2:NP_620097.1 Gene:Tmlhe / 192289 MGIID:2180203 Length:421 Species:Mus musculus


Alignment Length:356 Identity:127/356 - (35%)
Similarity:195/356 - (54%) Gaps:23/356 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 WLRDHCRCVECLNFETNQRRYDVLDLPADIMPLDVKYDGMNLQVQWSDAHKSNYDLDFIFDSQLE 83
            |||||||...|.|.:|:||..|...:...|.|..|..|...|...|.|.|.:.||||::..:..|
Mouse    75 WLRDHCRSASCYNSKTHQRSLDTASVDLCIKPKTVHLDETMLFFTWPDGHVTRYDLDWLVKNSYE 139

  Fly    84 RLIGRRSKSTNLTP---WNRSIILQNERHLRFPLPQL-----VSSDNEVRSLVESLVRYGIVFID 140
               |::.|.  :.|   ||..:..|.:      :|.:     :.::..::..:::.:.|||.|::
Mouse   140 ---GQKQKV--IQPRILWNSKLYQQAQ------VPSVDFQCFLETNEGLKKFLQNFLLYGIAFVE 193

  Fly   141 DVAPTANMTELALRRVFPLMKTFFGEMWTFSDNPDHADTAYTKLYLGSHTDNTYFCDAAGLQALH 205
            :|.||...||....|:..:.:|.:|.||.|:.:....|||||||.|..|||.|||.:..|:|..|
Mouse   194 NVPPTEEHTEKLAERISLIRETIYGRMWYFTSDFSRGDTAYTKLALDRHTDTTYFQEPCGIQVFH 258

  Fly   206 CIEHSGSGGENFFVDGLHVVHELKRRYPAAYDVLCSVQVPGEYIEK-GEHHYH---TAPIIQVDP 266
            |::|.|:||....|||.:...::.::.|..:::|..|.:..||||. |:.|.|   ..||:.:.|
Mouse   259 CLKHEGTGGRTLLVDGFYAAQQVLQKAPEEFELLSKVPLKHEYIENVGQCHNHMIGVGPILNIYP 323

  Fly   267 LTQEFVQLRLNVYDRAVFNTIPQAEMAEFYDSLRQLLLIVRDKQQQWALKLCPGSIVLFDNWRVL 331
            ..:|...:|.|.|||||.||:|...:..:|.:.|.|...:|..:.:..:||.||.::..||||||
Mouse   324 WNKELYLIRYNNYDRAVINTVPYDVVHRWYTAHRTLTTELRRPENELWVKLKPGKVLFIDNWRVL 388

  Fly   332 HGREAYTGSRTMSGSYVQRTDFLSKARVLGI 362
            ||||::||.|.:.|.|:.|.|.|:.||:||:
Mouse   389 HGRESFTGYRQLCGCYLTRDDVLNTARLLGL 419

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4335NP_650886.1 carnitine_TMLD 19..361 CDD:274119 125/353 (35%)
DUF971 <19..70 CDD:294847 21/50 (42%)
CAS_like 110..350 CDD:294121 88/248 (35%)
TmlheNP_620097.1 carnitine_TMLD 70..419 CDD:274119 126/354 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 184 1.000 Domainoid score I3407
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H21853
Inparanoid 1 1.050 242 1.000 Inparanoid score I3307
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D534559at33208
OrthoFinder 1 1.000 - - FOG0005559
OrthoInspector 1 1.000 - - oto92254
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR10696
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2023
SonicParanoid 1 1.000 - - X4529
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1010.100

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