DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4335 and gbh-1

DIOPT Version :9

Sequence 1:NP_650886.1 Gene:CG4335 / 42421 FlyBaseID:FBgn0038795 Length:364 Species:Drosophila melanogaster
Sequence 2:NP_496305.1 Gene:gbh-1 / 174648 WormBaseID:WBGene00001522 Length:421 Species:Caenorhabditis elegans


Alignment Length:383 Identity:89/383 - (23%)
Similarity:153/383 - (39%) Gaps:59/383 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 WLRD--------------HCRCVECLNFETNQRRYDVLDLPADIMPLDVKYDGMNLQVQWSDAHK 69
            ||||              ..|.:..|.|:..|          :...|.:..|...|:::|.....
 Worm    44 WLRDTSPDPSTYTISPAMTARKLTMLEFDVEQ----------NARKLWIDEDANCLKIEWESGVL 98

  Fly    70 SNYDLDFI-FDSQLERLIGRRSKSTNLTP---WNRSIILQNERHL-RFPLPQLVSSDNEVRSLVE 129
            |.:..::: ..:..::...||.:...|.|   |.::.|   |..| :|...:.:.::..|...::
 Worm    99 SEFPSEWLKIRNPSDQEARRRRRKVYLFPEQTWGKAEI---EGKLKKFSHEEFMKNEQVVHDFLQ 160

  Fly   130 SLVRYGIVFIDDVAP--TANMTELALRRVFPLMKTFFGEMWTFSDNPDHADTAY-TKLYLGSHTD 191
            ::...||..:.. ||  .....|....|:..:.:|.||.::..|...|.::.|| :...|..|||
 Worm   161 AVCIDGIAVLKG-APQGVRGAVEAIGDRIGMIKRTHFGLVFEVSLKADASNMAYASNGGLPFHTD 224

  Fly   192 NTYFCDAAGLQALHCIEHSGSGGENFFVDGLHVVHELKRRYPAAYDVLCSVQVPGEYIEKG-EHH 255
            .........||.||.::.:..||.:.||||.||..:|:...|..:.:|.:..:  ||||:| :.|
 Worm   225 FPSLSHPPQLQMLHMLQSAEEGGHSLFVDGFHVAEQLRVEKPEIFKILTTQSM--EYIEEGYDVH 287

  Fly   256 YHTAPIIQVD-PLTQEFVQLRLNVYDRAVFNTIP--QAEMAEFYD-----------SLRQLLLIV 306
            ......|:.| .:......:|||  |....|.|.  .|..:.|||           :::......
 Worm   288 EINGKTIRFDYDMCARHKVIRLN--DDGKVNKIQFGNAMRSWFYDCEPSKVQDVYRAMKTFTEYC 350

  Fly   307 RDKQQQWALKLCPGSIVLFDNWRVLHGREAYTG----SRTMSGSYVQRTDFLSKARVL 360
            ...:.....:|..|..||:.|.|:||.|:.:..    :||::|.|.......|:.|.|
 Worm   351 YQPRNMLKFRLEDGDTVLWANQRLLHTRDGFRNAPEKARTLTGCYFDWDIVKSRVRFL 408

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4335NP_650886.1 carnitine_TMLD 19..361 CDD:274119 89/383 (23%)
DUF971 <19..70 CDD:294847 12/64 (19%)
CAS_like 110..350 CDD:294121 66/262 (25%)
gbh-1NP_496305.1 DUF971 25..>50 CDD:294847 4/5 (80%)
carnitine_bodg 27..410 CDD:274118 89/383 (23%)
CAS_like 125..399 CDD:238154 71/281 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2175
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG52475
OrthoDB 1 1.010 - - D534559at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2023
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.860

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