DRSC/TRiP Functional Genomics Resources

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Protein Alignment MtnC and Mt1m

DIOPT Version :9

Sequence 1:NP_650882.1 Gene:MtnC / 42416 FlyBaseID:FBgn0038790 Length:43 Species:Drosophila melanogaster
Sequence 2:XP_002728963.1 Gene:Mt1m / 100362623 RGDID:2324335 Length:61 Species:Rattus norvegicus


Alignment Length:49 Identity:14/49 - (28%)
Similarity:19/49 - (38%) Gaps:17/49 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 CGTNCKCQDTKCGDNCACNQDC-------------KCVCKN-GPKDQCC 40
            |..:|||:..||   .:|.:.|             .|:||. ..|..||
  Rat    15 CAGSCKCKQCKC---TSCKKSCCSCCPVGCAKCSQGCICKEASDKGSCC 60

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MtnCNP_650882.1 Metallothio_5 1..41 CDD:280273 14/49 (29%)
Mt1mXP_002728963.1 Metallothio 5..61 CDD:278557 14/49 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4738
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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