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Protein Alignment Ir92a and gria1a

DIOPT Version :9

Sequence 1:	NP_001097845.2	Gene:	Ir92a / 42415	FlyBaseID:	FBgn0038789	Length:	678	Species:	Drosophila melanogaster
Sequence 2:	NP_991161.1	Gene:	gria1a / 798689	ZFINID:	ZDB-GENE-020125-1	Length:	914	Species:	Danio rerio

Alignment Length:	605	Identity:	105/605 - (17%)
Similarity:	184/605 - (30%)	Gaps:	216/605 - (35%)

- Green bases have known domain annotations that are detailed below.

  Fly   154 ETAPTGPTGPHPDPRRGGGASVSTKNKDDGEGGAGNKTTSPYRDINFELWTQKFVGAVGNLDALL 218
            |..||||            ..|...|:|                       :|||...
Zfish   368 ELRPTGP------------KKVGYWNED-----------------------EKFVSTA------- 390

  Fly   219 LDAFLP--NETFANRVELYPNKLLNLQRRSLLVGSITYVPYTITNYVPAGQGDVDPIHPQWPNRS 281
              |::|  |||:            .||.|:.:|.:|...||.:          :...|..:...
Zfish   391 --AYMPGSNETY------------GLQNRTYIVTTILESPYVM----------LKKNHEHFTGN- 430

  Fly   282 LTFDGAEANVMKTFCQV--HNCHLRVEAYGADNWGGIYDNESS--DGMLGDIYEQRVEMAIGCIY 342
               |..|...::...::  |..:..:....||...|..|.|:.  :||:|::...:.::|:..:
Zfish   431 ---DKYEGYCVELAAEIAKHVGYHYILKIVADGKYGARDAETMMWNGMVGELVYGKADVAVAPL- 491

  Fly   343 NWYDGITETSHTIARSSVTILGPAPAPLPSWRTNIM----------------PFNNRAWLVLIST 391
                     :.|:.|..|....   .|..|...:||                |.....|:.::..
Zfish   492 ---------TITLVREEVIDFS---KPFMSLGISIMIKKPTKSKPGVFSFLDPLAYEIWMCIVFA 544

  Fly   392 LVICGTFLYFM-KYVSYRLR----------------YSGTQVKFHHSRKLEKSM-----LDIF-- 432
            .:.....|:.: ::..|...                .|..|...:...:.::|.     ..||
Zfish   545 YIGVSVVLFLVSRFSPYEWHADDCEDGAEENPNQPSSSSAQPGQNQQNQNQQSQEQTNEFGIFNS 609

  Fly   433 -----ALFIQQPSAPLSFDRFAPRFFLATILCA-----TITLENIYSGQLKSMLTFPFYSAPVDT 487
                 ..|:||..      ..:||.....|:..     |:.:.:.|:..|.:.||.....:|:::
Zfish   610 LWFSLGAFMQQGC------DISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIES 668

  Fly   488 IEKWA---------------------------QSGWKW--SAPSIIWVHTVQSSDLETEQILARN 523
            .|..|                           :..|.:  ||...::|.|.....:...:...:
Zfish   669 AEDLAKQTEIAYGTLDAGSTKEFFRRSKIAVFEKMWSYMKSADPSVFVKTTDEGVMRVRKSKGK- 732

  Fly   524 FEVHDYSYLSNVSFMPNYGFGIE-RLSSGSLSVGDYVSTEALENRIVLHDDLYFDYTRAVSIRGW 587
                 |:||.. |.|..|   || |....::.||..:.::.              |..|.. :|.
Zfish   733 -----YAYLLE-STMNEY---IEQRKPCDTMKVGGNLDSKG--------------YGIATP-KGS 773

  Fly   588 ILMPELNKHIRTCQETGLYFHWELEFIDKYMDKKKQEVLMDL----ANGHKVKGAPQALDVRNIA 648
            .|...:|..:....|.||            :||.|.:...|.    :.|...|....||.:.|:|
Zfish   774 PLRNPVNLAVLKLNEQGL------------LDKLKNKWWYDKGECGSGGGDSKDKTSALSLSNVA 826

  Fly   649 GALFVLAFGVAFAGCALVAE 668
            |..::|..|:..|....:.|
Zfish   827 GVFYILIGGLGLAMLVALVE 846

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.