DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir92a and grin2ab

DIOPT Version :9

Sequence 1:NP_001097845.2 Gene:Ir92a / 42415 FlyBaseID:FBgn0038789 Length:678 Species:Drosophila melanogaster
Sequence 2:XP_009304490.1 Gene:grin2ab / 570493 ZFINID:ZDB-GENE-070424-223 Length:1445 Species:Danio rerio


Alignment Length:517 Identity:99/517 - (19%)
Similarity:195/517 - (37%) Gaps:103/517 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   198 INFELWTQKFVGAVGNLDALLLDAFLPNETFANRVELYPNKLLNLQRRSLLVGSITYVPYTITNY 262
            :.|.:|.:  ..:.|::||        :|...:.|.|.....:.:....:|.|:      .:.|.
Zfish   375 LKFPVWPR--YNSFGDMDA--------DENHLSIVTLEERPFVIVDDVDILTGT------CMRNS 423

  Fly   263 VPAGQGDVDPIHPQWPNRSLTFDGAEANVMKTFCQ----------VHNCHLRVEAYGADNW-GGI 316
            ||.             .:.:..:..|.:.:|..|:          ..|.....:.|...|. .|.
Zfish   424 VPC-------------RKHIKDNTTEGSYVKKCCKGFCIDILKKIARNVKFTYDLYLVTNGKHGK 475

  Fly   317 YDNESSDGMLGDIYEQRVEMAIGCI---------YNWYDGITET--SHTIARSSVTILGPAPAPL 370
            ..|...:||:|::..::..||:|.:         .::.....||  |..::||:.|:   :|:..
Zfish   476 KINNVWNGMVGEVVYKKAVMAVGSLTINEERSEAIDFSVPFVETGISVMVSRSNGTV---SPSAF 537

  Fly   371 PSWRTNIMPFNNRAWLVL-ISTLVICGTFLYFMKYVS-YRLRYSGTQVKFHH--SRKLEKSMLDI 431
                  :.||:...|::: :..|::....::..:::| .....:..|.|..|  |..:.|::..:
Zfish   538 ------LEPFSASVWVMMFVMLLIVTAIAVFLFEFISPLGFNRNLAQGKDPHGPSFTIGKAVWLL 596

  Fly   432 FALFIQQPSAPLSFDRFAPRFFLATI--LCATITLENIYSGQLKSMLTFPFYSAPVDTIEKWAQS 494
            :.|.... |.|:...|.....|:.::  ..|.|.|.:..:.....|:...|........::..||
Zfish   597 WGLVFNN-SVPVQNPRGTTSKFIVSVWAFFAVIFLASYTANLAAFMIQEEFVDQVTGLSDRKFQS 660

  Fly   495 GWKWSAPSIIWVHTVQSSDLETEQILARNF-EVHDYSYLSNVSFMPNY---GF--GIERLSSGSL 553
            .:.:|.|  ....||.:.  .||:.:.:|: .:|.|        |..|   |.  .:..|.:|.|
Zfish   661 PYSYSPP--FRFGTVPNG--STERNIRKNYPAMHQY--------MVKYHQTGVVDALVSLKTGKL 713

  Fly   554 SVGDYVSTEALENRIVLHDDLYFDYTRAVSIRGWILMPELNKHIRTCQETGLYFHWE-------L 611
            ..  ::...|:.|.:...|    |..:.|:|....:.......|  ..:.|.|  |:       |
Zfish   714 DA--FIYDAAVLNYMAGRD----DGCKLVTIGSGYIFATTGYGI--AMQKGSY--WKRLVDLAIL 768

  Fly   612 EFI-DKYMDKKKQEVLMDLANGHKVKGAPQALDVRNIAGALFVLAFGVAFAGCALVAELLIH 672
            ..| |..|::.:.:.|..:.:..|.:.....|||.|:||..::||..:|.:....|.|.|.:
Zfish   769 GIIGDGEMEELEAQWLTGICHNEKNEVMSSQLDVDNMAGVFYMLAAAMALSLITFVWEHLFY 830

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir92aNP_001097845.2 None
grin2abXP_009304490.1 PBP1_iGluR_NMDA_NR2 25..382 CDD:107373 2/6 (33%)
ANF_receptor 48..358 CDD:279440
PBP2_iGluR_NMDA_Nr2 393..790 CDD:270436 81/447 (18%)
Lig_chan 544..816 CDD:278489 59/294 (20%)
NMDAR2_C 827..1445 CDD:287527 1/4 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170591461
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.930

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