DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir92a and grik1b

DIOPT Version :9

Sequence 1:NP_001097845.2 Gene:Ir92a / 42415 FlyBaseID:FBgn0038789 Length:678 Species:Drosophila melanogaster
Sequence 2:XP_690040.5 Gene:grik1b / 561540 ZFINID:ZDB-GENE-070821-1 Length:906 Species:Danio rerio


Alignment Length:755 Identity:142/755 - (18%)
Similarity:254/755 - (33%) Gaps:232/755 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 LSQLLRI-IVGQYFAEFPSILIVYNNSASTTPLQLEYLSALELVLRELSKPIRLQWINVAFLKDL 73
            |.|||.: ::.:|:..|.:.|.:|:       |.||              |.|...:|:...:.|
Zfish   267 LKQLLSMGMMTEYYHFFFTTLDLYS-------LDLE--------------PFRYSGVNMTGFRLL 310

  Fly    74 NDLEDQVMGAL--------------NSSVTEGFITILSQTHHFIHARYYATRNANVRLKDKRYLF 124
            |....||...:              .:.:.:|.:|..:.   .::...|....|:.|        
Zfish   311 NIDNPQVASVVEKWSMERLQAPPKPETGLQDGMMTTEAA---LMYDAVYMVAAASQR-------- 364

  Fly   125 LCEDESPAELLCMDILQFYPHHLMVRPGTETAPTGPTGPHPDPRRGGGASVSTKNKDDGEGGAG- 188
                   |..:.:..||.:.|                    .|.|.|...:|...:....|..| 
Zfish   365 -------ASQITVSSLQCHRH--------------------KPWRFGSRFISMFKEAQWNGLTGQ 402

  Fly   189 ---NKTTSPYRDINFELWTQKFVG-----------------AVGNLDALLLDAFLPNETFANRVE 233
               |||....:|.:.::.:.|..|                 .|.|.:..|      |.|.:|: :
Zfish   403 IIINKTDGLRKDFDLDIISLKEDGLEKPLESGRFNKVWKKIGVWNSNTGL------NLTDSNK-D 460

  Fly   234 LYPNKLLNLQRRSLLVGSITYVPYTITNYVPAGQGDVDPIHPQWPNRSLTFDGAEANVMKTFCQV 298
            ...|...::..|:|:|.:|...||.:  |..:.:       |.:.|.  .|:|...:::|....:
Zfish   461 KNTNVTDSMANRTLIVTTILENPYVM--YKKSDK-------PLYGND--RFEGYCLDLLKELSNI 514

  Fly   299 HNCHLRVE-----AYGADNWGGIYDNESSDGMLGDIYEQRVEMAIGCIYNWY--DGITETSHTIA 356
            ......|:     .|||.|     |....:||:.::.:...::|:..:...|  :.:.:.|....
Zfish   515 LGFSYEVKLVTDGKYGAQN-----DKGEWNGMVRELIDHVADLAVAPLTITYVREKVIDFSKPFM 574

  Fly   357 RSSVTILGPAP-APLPSWRTNIMPFNNRAWL-VLISTL-VICGTFLY--FMKYVSYRLR--YSGT 414
            ...::||...| ...|...:.:.|.:...|: ||::.| |.|..|:.  |..|..|...  ...:
Zfish   575 TLGISILYHKPNGTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLFVIARFTPYEWYNPHPCNPDS 639

  Fly   415 QVKFHHSRKLEKSMLDIFALFIQQPSAPLSFDRFAPRFFLATILCA-----TITLENIYSGQLKS 474
            .|..::...:......:.|| :||.|      ...|:.....|:..     |:.:.:.|:..|.:
Zfish   640 DVVENNFTLINSVWFGVGAL-MQQGS------ELMPKALSTRIVGGIWWFFTLIIISSYTANLAA 697

  Fly   475 MLTFPFYSAPVDTIEKWA-QSGWKWSAPSIIWVHTVQSSDLETEQILARNFEVHDY----SYLS- 533
            .||.....:|:|:.:..| |:..::.|        |:.....|   ..:..::..|    :::| 
Zfish   698 FLTVERMDSPIDSADDLAKQTKIEYGA--------VRDGSTMT---FFKKSKISTYEKMWAFMSS 751

  Fly   534 --NVSFMPNYGFGIERLSSGSLSVGDYVSTEALENRIVLHDDLYFDYTRAVSIRGWILMPELNKH 596
              |.:.:.|...||:|:.:     .||.         :|.:....:|...               
Zfish   752 RKNTALVKNNREGIQRVLT-----TDYA---------LLMESTSIEYISQ--------------- 787

  Fly   597 IRTCQET---GLYFHWELEFIDK------------YMDKKKQEVLMDLANG--HKVK-------G 637
             |.|..|   ||        ||.            |.||....:|.....|  |.:|       |
Zfish   788 -RNCNLTQIGGL--------IDSKGYGVGTPIGSPYRDKVTIAILQLQEEGKLHMMKEKWWRGNG 843

  Fly   638 APQ-------ALDVRNIAGALFVLAFGVAFAGCALVAELL 670
            .|:       ||.|.||.|...|||.|:..:....:.|.:
Zfish   844 CPEEDSKEASALGVENIGGIFIVLAAGLVLSVFVAIGEFI 883

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir92aNP_001097845.2 None
grik1bXP_690040.5 Periplasmic_Binding_Protein_Type_1 62..455 CDD:299141 43/252 (17%)
ANF_receptor 80..423 CDD:279440 37/214 (17%)
Periplasmic_Binding_Protein_Type_2 471..840 CDD:304360 83/440 (19%)
Lig_chan 602..871 CDD:278489 66/324 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170591594
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.840

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