DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir92a and grid1b

DIOPT Version :10

Sequence 1:NP_001097845.2 Gene:Ir92a / 42415 FlyBaseID:FBgn0038789 Length:678 Species:Drosophila melanogaster
Sequence 2:XP_009304811.1 Gene:grid1b / 557511 ZFINID:ZDB-GENE-121214-84 Length:1048 Species:Danio rerio


Alignment Length:671 Identity:116/671 - (17%)
Similarity:218/671 - (32%) Gaps:218/671 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    90 EGFITILSQTHHFIHARYYATRNANVR-LKDKRYLFLCEDESPAELLCMDILQFYPHHLMVRPGT 153
            ||::..|..::.:::.......||..| |:|:::      .|.|.|.|            :|..|
Zfish   311 EGYLQSLEVSNLYLYDSVLMLANAFYRKLEDRKW------HSMASLNC------------IRKST 357

  Fly   154 ETAPTGPTGPHPDPRRGGGASVSTKNKDDGEGGAG------NKTTSPYRDINFELWTQKFVGAVG 212
            :            |..||.:.:.|..|....|..|      |.:.|   .:.||:....|     
Zfish   358 K------------PWNGGWSMLETIQKGRITGLTGIMDFMENGSNS---HVQFEILGTSF----- 402

  Fly   213 NLDALLLDAFLPNETFANRVE--------------LYPNKLLN-LQRRSLLVGSITYVPYTITNY 262
                        :|||...::              |..:::.| :|..::.|.::...|:.:...
Zfish   403 ------------SETFGKDIKRLATWDSVHGLNGSLKESRIENGMQGVTVKVVTLLEDPFVMVAE 455

  Fly   263 VPAGQGDVDPIHPQWPNRSLTFDGAEANVMKTFCQVHNCHLRVEAYGADNWGGIYDNESSDGMLG 327
            ...||          |.|   :.|...:|::...::......:.......:|....|.|.:||:|
Zfish   456 NILGQ----------PKR---YKGFSIDVLEALAKILGFKYDIYQVADSKYGSQLSNGSWNGMIG 507

  Fly   328 DIYEQRVEMAIGC--IYNWYDGITETSHTIARSSVTILGPAPAPLPSWRTNIM----PFNNRAWL 386
            ::..:|.::|:..  |....:.:.:.|......||.||...|..    :.||.    ||:...|.
Zfish   508 ELINKRADLAVSAITITPERENVVDFSKRYMDYSVGILHRKPEE----KINIFSLFAPFDLAVWA 568

  Fly   387 VLISTLVICGTFLYFMKYVSYRLRYSGTQVKFHH----SRKLEKSMLDIFALFIQQPSAPLSFDR 447
            .:.:.:.:.|..::.:  ...::..|......||    |..|..::..::..|:||....: ...
Zfish   569 CIAAAIPVVGVLIFLL--TRMQMLRSQNPPGAHHASSMSNSLHSAIWIVYGAFVQQGGDSV-VGS 630

  Fly   448 FAPRFFLATILCATITLENIYSGQLKSMLTFPFYSAPVDTIEKWAQSGWKWSAPSIIWVHTVQSS 512
            .|.|..:.:....|:.:.:.|:..|.:.||.                             :...:
Zfish   631 VALRIVMGSWWLFTLIVCSSYTANLAAFLTV-----------------------------SRMDN 666

  Fly   513 DLETEQILARNFEVHDYSYLSNVSFMPNYGFGIERLSSGSLSVGDYV---STEALENRIVLHDDL 574
            .:.|.|.|||..:               :.:|..|.|    :|.||.   .|..||     .|..
Zfish   667 TIRTFQDLARQMD---------------FAYGTVRDS----AVYDYFKAKGTNPLE-----QDST 707

  Fly   575 YFDYTRAVSIRGW----ILMPELNKHIRTCQETGLYFHWELEFID-------------------- 615
            |.:..|.:|....    :..|  ::.||..::....|.|::..::                    
Zfish   708 YAELWRTISKNNGQDFSVSSP--SEGIRKAKKGPYAFLWDMAVVEYAALTDDDCTITVSGNSMSS 770

  Fly   616 -----------KYMDKKKQEVL---------------------MDLANGHKVKGAPQALDVRNIA 648
                       .|.|...|::|                     .||.:....:...::|.:.:.|
Zfish   771 KGYGIAMQHGSPYRDLISQKILELQEKGDLDVLKQKWWPRTGRCDLNSHSNAQPDGRSLKLHSFA 835

  Fly   649 GALFVLAFGVAFAGCALVAEL 669
            |...:||.|:..|  .|||.|
Zfish   836 GVFCILAAGLLLA--CLVAAL 854

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir92aNP_001097845.2 None
grid1bXP_009304811.1 PBP1_iGluR_delta_1 25..426 CDD:380615 29/164 (18%)
Periplasmic_Binding_Protein_Type_2 437..809 CDD:473866 71/446 (16%)

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