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Protein Alignment Ir92a and Gria3

DIOPT Version :9

Sequence 1:	NP_001097845.2	Gene:	Ir92a / 42415	FlyBaseID:	FBgn0038789	Length:	678	Species:	Drosophila melanogaster
Sequence 2:	NP_001268858.2	Gene:	Gria3 / 53623	MGIID:	95810	Length:	888	Species:	Mus musculus

Alignment Length:	440	Identity:	81/440 - (18%)
Similarity:	158/440 - (35%)	Gaps:	106/440 - (24%)

- Green bases have known domain annotations that are detailed below.

  Fly   302 HLRVE---AYGADNWGGIYDNESS--DGMLGDIYEQRVEMAIGCIYNWYDGITETSHTIARSSVT 361
            |:|::   :...|...|..|.|:.  :||:|::...|.::|:..:          :.|:.|..|.
Mouse   459 HVRIKYKLSIVGDGKYGARDPETKIWNGMVGELVYGRADIAVAPL----------TITLVREEVI 513

  Fly   362 ILGPAPAPLPSWRTNIM----------------PFNNRAWLVLISTLVICGTFLYFMKYVS---Y 407
            ...   .|..|...:||                |.....|:.::...:.....|:.:...|   :
Mouse   514 DFS---KPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFSPYEW 575

  Fly   408 RLRYSGTQVKFHHSRKLEKSMLDIF-------ALFIQQPSAPLSFDRFAPRFFLATILCA----- 460
            .|..:..:.:...|.....:...||       ..|:||..      ..:||.....|:..
Mouse   576 HLEDNNEEPRDPQSPPDPPNEFGIFNSLWFSLGAFMQQGC------DISPRSLSGRIVGGVWWFF 634

  Fly   461 TITLENIYSGQLKSMLTFPFYSAPVDTIEKWAQSGWKWSAPSIIWVHTVQSSDLETEQILARN-F 524
            |:.:.:.|:..|.:.||.....:|:::.|..|:.       :.|...|:.|.  .|::...|: .
Mouse   635 TLIIISSYTANLAAFLTVERMVSPIESAEDLAKQ-------TEIAYGTLDSG--STKEFFRRSKI 690

  Fly   525 EVHD--YSYLSNVS---FMPNYGFGIERL--SSGSL------SVGDYVSTEALENRIVLHDDLYF 576
            .|::  :||:.:..   |......|:.|:  |.|..      ::.:|:......:.:.:..:|..
Mouse   691 AVYEKMWSYMKSAEPSVFTKTTADGVARVRKSKGKFAFLLESTMNEYIEQRKPCDTMKVGGNLDS 755

  Fly   577 DYTRAVSIRGWILMPELNKHIRTCQETGLYFHWELEFIDKYMDKKKQEVLMDLAN-GHKVKGA-- 638
            ......:.:|..|...:|..:....|.|:            :||.|.:...|... |.|..|:
Mouse   756 KGYGVATPKGSALRTPVNLAVLKLSEQGI------------LDKLKNKWWYDKGECGAKDSGSKD 808

  Fly   639 -PQALDVRNIAGALFVLAFGVAFAGCALVAELL---------IHRMDLSK 678
             ..||.:.|:||..::|..|:   |.|::..|:         ..||.|:|
Mouse   809 KTSALSLSNVAGVFYILVGGL---GLAMMVALIEFCYKSRAESKRMKLTK 855

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.