DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir92a and grid2

DIOPT Version :9

Sequence 1:NP_001097845.2 Gene:Ir92a / 42415 FlyBaseID:FBgn0038789 Length:678 Species:Drosophila melanogaster
Sequence 2:NP_001004123.1 Gene:grid2 / 448841 ZFINID:ZDB-GENE-040913-1 Length:1009 Species:Danio rerio


Alignment Length:741 Identity:135/741 - (18%)
Similarity:253/741 - (34%) Gaps:253/741 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 IVYNNSASTTPLQLEYLSALELVLRELSKPIRLQWINVAF--------------------LKDLN 74
            |:.|...|...:|       |||::.:.   ||..:...|                    |.|..
Zfish   259 IIINEEISDMDVQ-------ELVMKSIG---RLTLVRQTFPLPQNTSQRCVRNNHRINTSLCDPK 313

  Fly    75 DLEDQVMGALNSSVTEGFITILSQTHHFIHARYYATRNANVRLKDKRYLFLCEDESPAELLCMDI 139
            |.:.|::...|..:.: .:.:|:.|.|             .:|:|:::      .|.|.|.|   
Zfish   314 DPKAQMLEITNRYIYD-TVLLLANTFH-------------RKLEDRKW------HSMASLSC--- 355

  Fly   140 LQFYPHHLMVRPGTETAPTGPTGPHPDPRRGGGASVSTKNKDDGEGGAGNKT---------TSPY 195
                     :|.|::            |.:||.:.:.|..|    ||....|         ::| 
Zfish   356 ---------IRKGSK------------PWQGGKSMLETVKK----GGVSGLTSLLEFNDNGSNP- 394

  Fly   196 RDINFEL------------------WTQKFVGAVGNLDALLLDAFLPNETFANRVELYPNKLLNL 242
             :|:||:                  |     ..:..|:..|.|..|.|               |:
Zfish   395 -NIHFEILGTNYGEDRGRGVSRLATW-----DPIHGLNGTLTDRKLEN---------------NM 438

  Fly   243 QRRSLLVGSITYVPYTITNYVPAGQGDVDPIHPQWPNRSLTFDGAEANVMKTFCQVHNCHLRVEA 307
            :...|.|.::...|:.:.:....|:          |.:   :.|...:|:...  .:....:.|.
Zfish   439 RGVVLRVVTVLEEPFVMVSENVLGK----------PKK---YQGFSIDVLDAL--ANYLGFKYEI 488

  Fly   308 YGADNWGGIYDNESSD----GMLGDIYEQRVEMAIGCIYNWYDGITETSHTIARSSV-------- 360
            |.|.:..  |.::.:|    |::|::..:|.::          |::..:.|..|.||        
Zfish   489 YVAPDHK--YGSQQADGTWNGLIGELVFKRADV----------GLSALTITPERESVVDFTTRYM 541

  Fly   361 -----TILGPAPAPLPSWRTNIMPFNNRAWLVLISTLVICGTFLYFMKYVS-YRLRYSGTQVKFH 419
                 .:|..|...:..:.. :.||:...|..:..|:::.||.:|.:.::: .||......    
Zfish   542 DYSVGVLLRKAERTVDMFAC-LAPFDLSLWACIAGTVLLVGTLVYLLNWLNPPRLPMGSVS---- 601

  Fly   420 HSRKLEKSMLDIFALFIQQPSAPLSFDRFAPRFFLATILCATITLENIYSGQLKSMLTFPFYSAP 484
             |..|..||..::..|:|| ...:.:...|.|..:.......:.:.:.|:..|.:.||       
Zfish   602 -STTLYNSMWFVYGSFVQQ-GGEVPYTTLATRMMMGVWWLFALIVISSYTANLAAFLT------- 657

  Fly   485 VDTIEKWAQSGWKWSAPSIIWVHTVQSSDLETEQILARNFEVHD----YSYL-----------SN 534
            :..||...||....:..:.:...||..|.: .:|:.::.....:    ||.:           :|
Zfish   658 ISRIENSIQSLQDLAKQTDLPYGTVLDSAV-YDQVRSKGMNPFERDPMYSQMWRMINRTGGAENN 721

  Fly   535 VSFMPNYGFGIERLSSGSLSVGDYVSTEALENRIVLHDDLYFDYT--RAVSIRGWILMPELNKHI 597
            |.....   ||.::..|..:   :|...|:...:.::|:....||  ..|:.||:          
Zfish   722 VEESKE---GIRKVKYGRFA---FVWDAAVLEYVAINDEDCSLYTVSNNVADRGY---------- 770

  Fly   598 RTCQETGLYFHWELEFIDKYMDKKKQEVLMDLANGH----KVKGAPQ-----------------A 641
                  |:    .::....|.|...|.:|....||.    |:|..|:                 |
Zfish   771 ------GM----AMQHGSPYRDIFSQRILELQQNGDMDILKLKWWPRDSPCDLYSPVGTRKSGSA 825

  Fly   642 LDVRNIAGALFVLAFGVAFAGCALVA 667
            ||:.:.||..||||.||..:  .|:|
Zfish   826 LDIHSFAGVFFVLAAGVVLS--CLIA 849

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir92aNP_001097845.2 None
grid2NP_001004123.1 PBP1_iGluR_delta_2 28..427 CDD:107386 40/232 (17%)
ANF_receptor 42..404 CDD:279440 38/204 (19%)
PBP2_iGluR_delta_2 440..806 CDD:270449 76/433 (18%)
Lig_chan 568..841 CDD:278489 62/312 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 989..1009
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170591519
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.840

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