DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ir92a and GluRIID

DIOPT Version :9

Sequence 1:NP_001097845.2 Gene:Ir92a / 42415 FlyBaseID:FBgn0038789 Length:678 Species:Drosophila melanogaster
Sequence 2:NP_651982.1 Gene:GluRIID / 44483 FlyBaseID:FBgn0028422 Length:902 Species:Drosophila melanogaster


Alignment Length:776 Identity:140/776 - (18%)
Similarity:248/776 - (31%) Gaps:209/776 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 LQPLVMHLSQLLRIIVGQYFAEFPSILIVYNNSASTTPLQLEYLSALE----------LVLRELS 57
            |.|....::..|..||.|:  |:...:..|.::        |||..|:          .|::.:.
  Fly   135 LHPSPEDIANALYDIVNQF--EWSRFIFCYESA--------EYLKILDHLMTRYGIKGPVIKVMR 189

  Fly    58 KPIRLQWINVAFLKDLNDLEDQVMGALNSSVTEGFITILSQTH------------------HFIH 104
            ..:.|.....:.|:.:...||..:..:.|  |.|...:|.|..                  |...
  Fly   190 YDLNLNGNYKSVLRRIRKSEDSRIVVVGS--TTGVAELLRQAQQVGIMNEDYTYIIGNLNLHTFD 252

  Fly   105 ARYYATRNANVR--------------LKDKRYLFLCEDE---SPAELLCMDILQFYPHHLMVRPG 152
            ...|....||:.              |.:|.:..|.|.|   |.:..:.|::...|....::...
  Fly   253 LEEYKYSEANITGIRMFSPDQEEVRDLMEKLHQELGESEPVNSGSTFITMEMALTYDAVRVIAET 317

  Fly   153 TETAPTGP-----TGPHPDPRRGGGA------SVSTKNKD-------DG---------------- 183
            |:..|..|     :..|.:.:..|..      |:..|.|.       :|                
  Fly   318 TKHLPYQPQMLNCSERHDNVQPDGSTFRNYMRSLEIKEKTITGRIYFEGNVRKGFTFDVIELQTS 382

  Fly   184 --------EGGAGNKTTSPYRDINFELWTQKFVGAVGNLDALLLDAFLPNETFANRVELYPNKLL 240
                    |.|...:...|.:.:||           .::|    |..|.|:||            
  Fly   383 GLVKVGTWEEGKDFEFQRPPQAVNF-----------NDID----DGSLVNKTF------------ 420

  Fly   241 NLQRRSLLVGSITYVPYTITNYVPAGQGDVDPIHPQWPNRSLTFDGAEANVMKTFCQVHNCHLRV 305
                  :::.|:...||...         |:.|.....|..  |.|...:::|........:...
  Fly   421 ------IVLISVATKPYASL---------VESIDTLIGNNQ--FQGYGVDLIKELADKLGFNFTF 468

  Fly   306 EAYGADNWGGIYDNESSDGMLGDIYEQRVEMAIG--CIYNWYDGITETSHTIARSSVTILGPAPA 368
            ...|.|.........|:.|||.:|.|.|.::||.  .|.:..:.:.:.|.......:.||...|.
  Fly   469 RDGGNDYGSFNKTTNSTSGMLKEIVEGRADLAITDLTITSEREEVIDFSIPFMNLGIAILYVKPQ 533

  Fly   369 PLPSWRTNIM-PFNNRAWLVLISTLVICGTFLYFMKYVSYRL---RYSGTQVKFHHSRKLE---- 425
            ..|....:.| ||::..||.|  .:...|..|.|  ::..||   .:...........:||    
  Fly   534 KAPPALFSFMDPFSSEVWLYL--GIAYLGVSLCF--FIIGRLSPIEWDNPYPCIEEPEELENQFT 594

  Fly   426 --KSMLDIFALFIQQPSAPLSFDRFAPRFFLATILCA-----TITLENIYSGQLKSMLTFPFYSA 483
              .|:.......:||.|      ..||:......:.|     |:.:.:.|:..|.:.||....::
  Fly   595 INNSLWFTTGALLQQGS------EIAPKALSTRTISAIWWFFTLIMVSSYTANLAAFLTIENPTS 653

  Fly   484 PVDTIEKWAQSGWKWSAPSIIWVHTVQSSDLETEQILARNF----------EVHDYSYLSNVSFM 538
            |:::::..|.:           ...||.....|..  .|||          ::::|........|
  Fly   654 PINSVKDLADN-----------KDDVQYGAKRTGS--TRNFFSTSEEPIYIKMNEYLNAHPEMLM 705

  Fly   539 PNYGFGIERLSSGSLSVGDYVSTEALE-------NRIVLHDDLYFDYTRAVSIRGWILMPELNKH 596
            .|...|::::.||: .....:.:.::|       |...:.|.|.........::.|....:.||.
  Fly   706 ENNQQGVDKVKSGT-KYAFLMESTSIEFNTVRECNLTKVGDPLDEKGYGIAMVKNWPYRDKFNKA 769

  Fly   597 IRTCQETGLYFHWELEFIDKYMDKKKQEVLMDLANGHKVKGAPQALDVRNIAGALFVLAFG 657
            :...||.|:        :.:..:|...||...:.:.......|..|.|.|::|...||..|
  Fly   770 LLELQEQGV--------LARLKNKWWNEVGAGVCSAKSDDDGPSELGVDNLSGIYVVLVIG 822

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir92aNP_001097845.2 None
GluRIIDNP_651982.1 PBP1_iGluR_Kainate 35..397 CDD:107377 45/273 (16%)
ANF_receptor 46..380 CDD:279440 43/256 (17%)
PBP2_iGluR_Kainate 417..788 CDD:270432 79/431 (18%)
Lig_chan 549..819 CDD:278489 54/301 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45462846
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

Return to query results.
Submit another query.