DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir92a and Ekar

DIOPT Version :9

Sequence 1:NP_001097845.2 Gene:Ir92a / 42415 FlyBaseID:FBgn0038789 Length:678 Species:Drosophila melanogaster
Sequence 2:NP_001036250.1 Gene:Ekar / 43806 FlyBaseID:FBgn0039916 Length:899 Species:Drosophila melanogaster


Alignment Length:759 Identity:140/759 - (18%)
Similarity:263/759 - (34%) Gaps:216/759 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 MHLSQLLRIIVGQYFAEFPS----ILIVYNNSASTTPLQLEYLSALELVLRELSKPIRLQWINVA 68
            :|:.|:.|........||..    .:|:..||...:.|       |:.:|::.....:..::..:
  Fly   173 VHMRQVSRDSYVSALNEFKGKEIHNIIIDTNSNGISIL-------LKNILQQQMNEYKYHYLFTS 230

  Fly    69 FLKDLNDLEDQVMGALN-------SSVTEGFITILSQ----THHFIHARYYATRNANVRLKDKRY 122
            |..:..||||.....:|       .:...|...||..    :||.....|     .|:.:|....
  Fly   231 FDLETYDLEDFKYNFVNITSFRLVDTADVGVKQILKDIGLYSHHIFKKPY-----LNLHIKKSTI 290

  Fly   123 LFLCEDESPAELLCMDILQFYPHHLMVRPGTETAPTGPTGPHPDPRRGGGASVSTKNKDDGEGGA 187
            |    :..||  |..|.:..:...|.....:.:...              .::|.:.::..:||.
  Fly   291 L----ESEPA--LMFDSVYVFAIGLQTLEQSHSLTL--------------LNISCEEENSWDGGL 335

  Fly   188 G----------NKTTSP--YRD---INFEL---------------WTQKFVGAVGNLD----ALL 218
            .          ...|.|  ::|   :.|:|               ||..     |:|:    ::.
  Fly   336 SLINYLNAVEWKGLTGPIQFKDGQRVQFKLDLIKLKQHSIVKVGEWTPH-----GHLNITEPSMF 395

  Fly   219 LDAFLPNETFANRVELYPNKLLNLQRRSLLVGSITYVPYTITNYVPAGQGDVDPIHPQWPNRSLT 283
            .||...|.|                   |:|.:|...||.:.:|                .::.|
  Fly   396 FDAGSMNVT-------------------LVVITILETPYVMMHY----------------GKNFT 425

  Fly   284 ----FDGAEANVMKTFCQVHNCHLRVE-----AYGADNWGGIYDNESSD--GMLGDIYEQRVEMA 337
                |.|...::::|..:.......::     .|||.      |.|:.:  ||:..:.:.:.::|
  Fly   426 GNERFYGFCVDILETISREVGFDYILDLVPDRKYGAK------DPETGEWNGMVAQLMKYKADLA 484

  Fly   338 IGCIYNWY--DGITETSHTIARSSVTILGPAPAPLPSWRTNIMPFNN----RAWLVLISTLVICG 396
            :|.:...|  :.:.:.:.......::||...|...|   |.:..|.|    ..|:.::....:..
  Fly   485 VGSMTITYARESVIDFTKPFMNLGISILFKVPTSEP---TRLFSFMNPLAIEIWIYVLIAYFLVS 546

  Fly   397 TFLYFMKYVSYRLRYSGTQVKFHHSRKLEK-------SMLDIF----ALFIQQPSAPLSFDRFAP 450
            ..:|.:.      :.|..:.|..::..||.       |:.|.|    ..|:||     |.|.: |
  Fly   547 LCIYIVG------KLSPIEWKCINACDLENISIGNQFSLTDSFWFTIGTFMQQ-----SPDIY-P 599

  Fly   451 RFFLATILCAT-----ITLENIYSGQLKSMLTFPFYSAPVDTIEKWAQS-----GWKWSAPSIIW 505
            |.....|:.:|     :.:...|:..|.:.||......|::..|..|..     |...|..::.:
  Fly   600 RAMSTRIISSTWGFFSLIIVASYTANLAAFLTTERMINPIENAEDLASQTEISYGTLDSGSTMTF 664

  Fly   506 VHTVQSSDLETEQILARNFEVHDYSYLSNVSFMPNYGFGIERLSSGSLSVGDYVSTEALENRIVL 570
               .:.|.:||.:.:.|:.:....|     :|...|..||:|::.|:.:   ::....:.:.||.
  Fly   665 ---FRDSVIETYKKIWRSMDNKKPS-----AFTTTYEDGIKRVNQGNYA---FLMESTMLDYIVQ 718

  Fly   571 HDDLYFDYTRAVSIRGW-ILMP-------ELNKHIRTCQETG----LYFHWELEFIDKYMDKKKQ 623
            .|.........:..:|: |..|       :::..|...||.|    ||..| .:..|:...:|  
  Fly   719 RDCNLTQIGGLLDTKGYGIATPKGSPWRDKISLAILELQERGDIQMLYDKW-WKNTDETCTRK-- 780

  Fly   624 EVLMDLANGHKVKGAPQALDVRNIAGALFVLAFGVAFAGCALVA 667
                   |..|...| .:|.:.:|.|...||..|:..|  |:||
  Fly   781 -------NTSKQSKA-NSLGLESIGGVFVVLIAGIIVA--AVVA 814

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir92aNP_001097845.2 None
EkarNP_001036250.1 PBP1_iGluR_Kainate 24..388 CDD:107377 42/251 (17%)
ANF_receptor 39..371 CDD:279440 39/229 (17%)
PBP2_iGluR_Kainate 402..771 CDD:270432 80/436 (18%)
Lig_chan 533..807 CDD:278489 61/307 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45463073
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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