Protein Alignment Ir92a and GluRIIC

DIOPT Version :9

• Sequence 1: NP_001097845.2
• Gene: Ir92a / 42415
• FlyBaseID: FBgn0038789
• Length: 678
• Species: Drosophila melanogaster
• Sequence 2: NP_608557.4
• Gene: GluRIIC / 33275
• FlyBaseID: FBgn0046113
• Length: 940
• Species: Drosophila melanogaster
• Alignment Length: 593
• Identity: 119/593 - (20%)
• Similarity: 189/593 - (31%)
• Gaps: 195/593 - (32%)

  Fly     3 LQPLVMHLSQLLRIIVGQYFAEFPSILIVYNNSASTTPLQLEYLSALELVLRELSKPI------- 60
            |.|....||:....|| |.|. :....|||:...:....:|:.|    |.|||:...:
  Fly   137 LYPAQAILSKAYADIV-QNFG-WRKFTIVYDADDARAAARLQDL----LQLREVHNDVVRVRKFH 195

  Fly    61 -----RLQWINV-AFLKDLNDLEDQVMGALNSSVTEGFITILSQTHHFI---------HARYYAT 110
                 |:.|.:: ...:.:.|.|..::..|.:|.||..:|  .|.:|..         |....|.
  Fly   196 KDDDFRVMWKSIRGERRVVLDCEPNMLVELLNSSTEFGLT--GQYNHIFLTNLETYTDHLEELAA 258

  Fly   111 RNAN--VRLKDKRYL--------------------FLCEDESPAELLCMDILQ------------ 141
            .|..  |.:...|.|                    .:.|...|...|..|::.
  Fly   259 DNETFAVNITAARLLVNPDPPPYSLPYGYVTQRDNIVYESSDPPRTLIHDLIHDALQLFAQSWRN 323

  Fly   142 ---FYPHHLMV-RPGTETAPTG----PTGPHPDPRRGGGASVSTKN--------KDDGEGGAGN- 189
               |||..::| |...:.|.:|    ..|.:......|.:.|:..|        .:||:....|
  Fly   324 ASFFYPDRMVVPRITCDFAASGGRTWAMGRYLARLMKGTSGVNNTNFRTSILQFDEDGQRITFNI 388

  Fly   190 KTTSPYRDINFELWTQKFVGAVGNLDALLLDAFLPNETFANRVELY--------PNKLLNLQRRS 246
            :...|...|...:|..:     |.:..|.:|      ..|.:..:|        |....|...|.
  Fly   389 EVYDPLDGIGIAIWDPR-----GQITQLNVD------VKAQKKMIYRVATRIGPPYFSYNETARE 442

  Fly   247 L-LVGSITYVPYTITNYVPAGQGDVDPIHPQWPNRSLTFDGAEANVMKTFCQVHNCHLRVEAYGA 310
            | |.|:..|..|.:..        :|.|     .|.:.|:       ..|..|           |
  Fly   443 LNLTGNALYQGYAVDL--------IDAI-----ARHVGFE-------YVFVPV-----------A 476

  Fly   311 DNWGGIYDNESS--DGMLGDIYEQRVEMAIGCIYNWYDGITETSHTIARSS------------VT 361
            |...|..|.|:.  :|::|:|......|          ||.:.:.|.||.:            |:
  Fly   477 DQQYGKLDKETKQWNGIIGEIINNDAHM----------GICDLTITQARKTAVDFTVPFMQLGVS 531

  Fly   362 ILG-PAPAPLPSWRTNIMPFNNRAWL-VLISTLVICGTFLYFMKYVSYRL--------------- 409
            ||. .:|....:....:.||....|: :|||..|     :.|:|.:..|:
  Fly   532 ILAYKSPHVEKTLDAYLAPFGGEVWIWILISVFV-----MTFLKTIVARISKMDWENPHPCNRDP 591

  Fly   410 RYSGTQVKFHHSRKLEKSML-----DIFALFIQQPSAPLSFDRFAPRFFLATILCATITLENIYS 469
            .....|.:.|::..|..:.:     ||.      |.:|      ..|.|.||.....|.:.|.|:
  Fly   592 EVLENQWRIHNTGWLTVASIMTAGCDIL------PRSP------QVRMFEATWWIFAIIIANSYT 644

  Fly   470 GQLKSMLT 477
            ..|.:.||
  Fly   645 ANLAAFLT 652

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Ir92a	NP_001097845.2	None
GluRIIC	NP_608557.4	PBP1_iGluR_Kainate	26..404	CDD:107377	55/274 (20%)
		Periplasmic_Binding_Protein_Type_1	<279..363	CDD:299141	13/83 (16%)
		PBP2_iGluR_Kainate	423..794	CDD:270432	60/288 (21%)
		Lig_chan	554..828	CDD:278489	25/116 (22%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45462660
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	2	1.840