DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ir92a and GRIN2C

DIOPT Version :9

Sequence 1:NP_001097845.2 Gene:Ir92a / 42415 FlyBaseID:FBgn0038789 Length:678 Species:Drosophila melanogaster
Sequence 2:XP_016880033.1 Gene:GRIN2C / 2905 HGNCID:4587 Length:1337 Species:Homo sapiens


Alignment Length:634 Identity:120/634 - (18%)
Similarity:219/634 - (34%) Gaps:159/634 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   139 ILQFYPHHLMVRPGTETAPTGPTGPHPDPRRGGG-------ASVSTKNKD--DGEGGAGNKTTSP 194
            ||....|....:.||..||.|....||.|.....       .:|:.:.:|  ...||...:.|..
Human   370 ILALGAHSYWRQHGTLPAPAGDCRVHPGPVSPAREAFYRHLLNVTWEGRDFSFSPGGYLVQPTMV 434

  Fly   195 YRDIN-FELWTQKFVGAVGNLDALLLDAFLPNETFANRVELYPNKLLNLQ----RRSLLVGSITY 254
            ...:| ..||..     ||..:..:|....|         ::|....:||    .|.|.|.::..
Human   435 VIALNRHRLWEM-----VGRWEHGVLYMKYP---------VWPRYSASLQPVVDSRHLTVATLEE 485

  Fly   255 VPYTIT------------NYVPA--------GQGDVDPIHPQWPNRSLTFDGAEANVMKTFCQV- 298
            .|:.|.            |.||.        ..|||.|.      ..|...|...:::|...:| 
Human   486 RPFVIVESPDPGTGGCVPNTVPCRRQSNHTFSSGDVAPY------TKLCCKGFCIDILKKLARVV 544

  Fly   299 ---HNCHLRVEAYGADNWGGIYDNESSDGMLGDIYEQRVEMAIGC---------IYNWYDGITET 351
               ::.:|...........|::     :||:|::|.:|.:||||.         |.::.....||
Human   545 KFSYDLYLVTNGKHGKRVRGVW-----NGMIGEVYYKRADMAIGSLTINEERSEIVDFSVPFVET 604

  Fly   352 --SHTIARSSVTILGPAPAPLPSWRTNIMPFNNRAWL---VLISTLVICGTFLY-FMKYVSYRLR 410
              |..:|||:.|:   :|:..      :.|::...|:   |:..|:|....|:: :...|||...
Human   605 GISVMVARSNGTV---SPSAF------LEPYSPAVWVMMFVMCLTVVAITVFMFEYFSPVSYNQN 660

  Fly   411 YSGTQVKFHHSRKLEKSMLDIFALF------IQQPSAPLSFDRFAPRFFLATILCATITLENIYS 469
            .:..:.....:..:.||:..::||.      |:.|....|........|.|.|..|:.|      
Human   661 LTRGKKSGGPAFTIGKSVWLLWALVFNNSVPIENPRGTTSKIMVLVWAFFAVIFLASYT------ 719

  Fly   470 GQLKSMLTFPFYSAPVDTIEKWA--------QSGWKWSA----------------PSIIWVHTVQ 510
               .::..|......:||:...:        .:|..|:|                |...: .||.
Human   720 ---ANLAAFMIQEQYIDTVSGLSDKKSLHLENTGVAWTAFKTFCSDYFQRPQDQYPPFRF-GTVP 780

  Fly   511 SSDLETEQILARNF-EVHDYSYLSNVSFMPNYGFGIERLSSGSLSVGDYVSTEALENRIVLHDDL 574
            :.  .||:.:..|: ::|.:....|...:.:        :..||.:|........:....::|..
Human   781 NG--STERNIRSNYRDMHTHMVKFNQRSVED--------ALTSLKMGSEAQPVPRKLDAFIYDAA 835

  Fly   575 YFDYT---------------RAVSIRGWILMPELNKHIRTCQETGLYFHWELEFIDKYMDKKKQE 624
            ..:|.               :..:..|:.:..:.:.|.:...:..|     |:|:.....:|.:.
Human   836 VLNYMAGKDEGCKLVTIGSGKVFATTGYGIAMQKDSHWKRAIDLAL-----LQFLGDGETQKLET 895

  Fly   625 V-LMDLANGHKVKGAPQALDVRNIAGALFVLAFGVAFAGCALVAELLIH 672
            | |..:....|.:.....||:.|:||..::|...:..|......|.|::
Human   896 VWLSGICQNEKNEVMSSKLDIDNMAGVFYMLLVAMGLALLVFAWEHLVY 944



Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165156199
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.840

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