DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir92a and GRIK4

DIOPT Version :9

Sequence 1:NP_001097845.2 Gene:Ir92a / 42415 FlyBaseID:FBgn0038789 Length:678 Species:Drosophila melanogaster
Sequence 2:NP_001269399.1 Gene:GRIK4 / 2900 HGNCID:4582 Length:956 Species:Homo sapiens


Alignment Length:743 Identity:132/743 - (17%)
Similarity:250/743 - (33%) Gaps:227/743 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 SILIVYNNSASTTPLQLEYLSALELVLRELSKPIRLQWINVAF-LKDLNDLEDQVMGALNSSVTE 90
            :|:|..|.|.|.|.|    |.|.||.:  :|......:.|:.| |:.::.|.|..:..|      
Human   214 TIIIHANASMSHTIL----LKAAELGM--VSAYYTYIFTNLEFSLQRMDSLVDDRVNIL------ 266

  Fly    91 GFITILSQTHHFI----------------HARYYATRNANVRLKDKRYLFLC-------EDESPA 132
            || :|.:|:|.|.                |..:.....::..|.|..|..:.       ..|...
Human   267 GF-SIFNQSHAFFQEFAQSLNQSWQENCDHVPFTGPALSSALLFDAVYAVVTAVQELNRSQEIGV 330

  Fly   133 ELLCMDILQFYPHHLMVRPGTETAPTGPTGPHPDPRRGGGASVSTKNKDDGEGGAGN-KTTSPYR 196
            :.|.....|.:.|                         |.:.::.....:.||..|: :..|..:
Human   331 KPLSCGSAQIWQH-------------------------GTSLMNYLRMVELEGLTGHIEFNSKGQ 370

  Fly   197 DINFELWTQKF-------VGAVGNLDALLLDAFLPNETFANRVELYPNKLLNLQRRSLLVGSITY 254
            ..|:.|...:|       :|.....:.|.:|:.|    :|:.:.   :.|.|   .:|:|.:|..
Human   371 RSNYALKILQFTRNGFRQIGQWHVAEGLSMDSHL----YASNIS---DTLFN---TTLVVTTILE 425

  Fly   255 VPYTITNYVPAGQGDVDPIHPQWPNRSLTFDGAEANVMKTFCQVHNCHLRVEAYGADNWGGIYDN 319
            .||.:.      :|:    |.:..... .::|...:::|...::...:.::...|...:|....|
Human   426 NPYLML------KGN----HQEMEGND-RYEGFCVDMLKELAEILRFNYKIRLVGDGVYGVPEAN 479

  Fly   320 ESSDGMLGDIYEQRVEMAIGCIYNWYDGITETSH-----TIARSSVTI---------LGPAPAPL 370
            .:..||:|::..::.::|:.       |:|.|:.     ..::..:|:         :|..    
Human   480 GTWTGMVGELIARKADLAVA-------GLTITAEREKVIDFSKPFMTLGISILYRVHMGRK---- 533

  Fly   371 PSWRTNIMPFNNRAWLVLISTLVICGTFLYFMKYVSYRLRYS------GTQVKFHHSRKLEKSML 429
            |.:.:.:.||:...||.::...:.....|:.:..::....||      |......:...|..|:.
Human   534 PGYFSFLDPFSPGVWLFMLLAYLAVSCVLFLVARLTPYEWYSPHPCAQGRCNLLVNQYSLGNSLW 598

  Fly   430 DIFALFIQQPSAPLSFDRFAPRFFLATILCA-----TITLENIYSGQLKSMLTFPFYSAPVDTIE 489
            .....|:||.|.      .|||......:..     |:.:.:.|:..|.:.||......|:::::
Human   599 FPVGGFMQQGST------IAPRALSTRCVSGVWWAFTLIIISSYTANLAAFLTVQRMDVPIESVD 657

  Fly   490 KWA---------------------------QSGWKW---SAPSIIWVHTVQSSDLETEQILARNF 524
            ..|                           |..|.:   ..||:.    |:|::....::|..|:
Human   658 DLADQTAIEYGTIHGGSSMTFFQNSRYQTYQRMWNYMYSKQPSVF----VKSTEEGIARVLNSNY 718

  Fly   525 ------EVHDYSYLSNVS------FMPNYGFGIERLSSGSLSVGDYVSTEALENRIVLHDDLYFD 577
                  .:::|....|.:      .:...|:||      .:.||.           |..|:  ||
Human   719 AFLLESTMNEYYRQRNCNLTQIGGLLDTKGYGI------GMPVGS-----------VFRDE--FD 764

  Fly   578 YTRAVSIRGWILMPELNKHIRTCQETGLYFHWELEFIDKYMDKKKQEVLMDLANGHKVKGAPQAL 642
            ..        ||..:.|..:...:..    .||.....|..|             |:.||    |
Human   765 LA--------ILQLQENNRLEILKRK----WWEGGKCPKEED-------------HRAKG----L 800

  Fly   643 DVRNIAGALFVLAFGVAFAGCALVAELL 670
            .:.||.|...||..|:..|....:.|.|
Human   801 GMENIGGIFVVLICGLIVAIFMAMLEFL 828

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir92aNP_001097845.2 None
GRIK4NP_001269399.1 PBP1_iGluR_Kainate_KA1_2 26..400 CDD:107389 42/223 (19%)
ANF_receptor 43..382 CDD:279440 39/205 (19%)
PBP2_iGluR_kainate_KA1 415..785 CDD:270442 69/435 (16%)
Lig_chan 547..816 CDD:278489 57/326 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 863..889
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 931..956
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165155777
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.840

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