DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir92a and GRIK3

DIOPT Version :9

Sequence 1:NP_001097845.2 Gene:Ir92a / 42415 FlyBaseID:FBgn0038789 Length:678 Species:Drosophila melanogaster
Sequence 2:NP_000822.2 Gene:GRIK3 / 2899 HGNCID:4581 Length:919 Species:Homo sapiens


Alignment Length:788 Identity:159/788 - (20%)
Similarity:277/788 - (35%) Gaps:215/788 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 LQPLVMHLSQLLRIIVGQYFAEFPSILIVYNNSASTTPLQLEYLSA-----LELVLREL------ 56
            |.|....||..:..:| ||. ::.|..:||::|.....|| |.:.|     :.|.:|:|      
Human   152 LYPDYASLSHAILDLV-QYL-KWRSATVVYDDSTGLIRLQ-ELIMAPSRYNIRLKIRQLPIDSDD 213

  Fly    57 SKPIRLQWINVAFLKDLNDLED--------QVMGA--LNSSVTEGFITILSQTHHFIHAR--YYA 109
            |:|:         ||::....:        ..|.|  |..::..|.:|   :.:|||...  .||
Human   214 SRPL---------LKEMKRGREFRIIFDCSHTMAAQILKQAMAMGMMT---EYYHFIFTTLDLYA 266

  Fly   110 T-----RNANVRLKDKRYLFLCEDESP-----AELLCMDILQFYPH------------------- 145
            .     |.:.|.|...|.|.:   ::|     .|...|:.||..|.                   
Human   267 LDLEPYRYSGVNLTGFRILNV---DNPHVSAIVEKWSMERLQAAPRSESGLLDGVMMTDAALLYD 328

  Fly   146 --HLMVRPGTETAPTGPTGPHPDPR----RGGGASVSTKNKDDGEGGAG----NKTTSPYRDINF 200
              |: |....:.||..........|    |.||..::...:...||..|    |||:....|.:.
Human   329 AVHI-VSVCYQRAPQMTVNSLQCHRHKAWRFGGRFMNFIKEAQWEGLTGRIVFNKTSGLRTDFDL 392

  Fly   201 ELWTQK-----FVGAVGNLDALLLDAFLPNETFANRVELYPNKLLNLQRRSLLVGSITYVPYTIT 260
            ::.:.|     .||.....|.|.:     .|....|   .||...:|..|||:|.::...|:.:.
Human   393 DIISLKEDGLEKVGVWSPADGLNI-----TEVAKGR---GPNVTDSLTNRSLIVTTVLEEPFVMF 449

  Fly   261 NYVPAGQGDVDPIHPQWPNRSL----TFDGAEANVMKTFCQVHNCHLRVEAYGADNWGGIYDNES 321
                           :..:|:|    .|:|...:::|....:......:.......:|...|...
Human   450 ---------------RKSDRTLYGNDRFEGYCIDLLKELAHILGFSYEIRLVEDGKYGAQDDKGQ 499

  Fly   322 SDGMLGDIYEQRVEMAIG--CIYNWYDGITETSHTIARSSVTILGPAP-APLPSWRTNIMPFNNR 383
            .:||:.::.:.:.::|:.  .|.:..:...:.|.......|:||...| ...||..:.:.|.:..
Human   500 WNGMVKELIDHKADLAVAPLTITHVREKAIDFSKPFMTLGVSILYRKPNGTNPSVFSFLNPLSPD 564

  Fly   384 AWL-VLISTL-VICGTFLY--FMKYVSYRLR--YSGTQVKFHHSRKLEKSMLDIFALFIQQPSAP 442
            .|: ||::.| |.|..|:.  |..|..|...  ..|::|..::...|......:.:| :||.|  
Human   565 IWMYVLLAYLGVSCVLFVIARFSPYEWYDAHPCNPGSEVVENNFTLLNSFWFGMGSL-MQQGS-- 626

  Fly   443 LSFDRFAPRFFLATILCA-----TITLENIYSGQLKSMLTFPFYSAPVDTIEKWA-QSGWKWSAP 501
                ...|:.....|:..     |:.:.:.|:..|.:.||.....:|:|:.:..| |:..::.|.
Human   627 ----ELMPKALSTRIIGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAV 687

  Fly   502 SIIWVHT-VQSSDLETEQILARNFEVHDYSYLSN--VSFMPNYGFGIERLSSGSLSVGDYVSTEA 563
            ......| .:.|.:.|.:.:        ::::|:  .:.:.|...||:|..:     .||.    
Human   688 KDGATMTFFKKSKISTFEKM--------WAFMSSKPSALVKNNEEGIQRALT-----ADYA---- 735

  Fly   564 LENRIVLHDDLYFDYTRAVSIRGWILMPELNKHIRTCQET---GLYFHWELEFIDK--------- 616
                 :|.:....:|...                |.|..|   ||        ||.         
Human   736 -----LLMESTTIEYVTQ----------------RNCNLTQIGGL--------IDSKGYGIGTPM 771

  Fly   617 ---YMDKKKQEVLM----DLANGHKVK-----GAPQ-------ALDVRNIAGALFVLAFGVAFAG 662
               |.||....:|.    |..:..|.|     |.|:       ||.::.|.|...|||.|:..:.
Human   772 GSPYRDKITIAILQLQEEDKLHIMKEKWWRGSGCPEEENKEASALGIQKIGGIFIVLAAGLVLSV 836

  Fly   663 CALVAELL 670
            ...|.|.:
Human   837 LVAVGEFV 844

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir92aNP_001097845.2 None
GRIK3NP_000822.2 PBP1_iGluR_Kainate_GluR5_7 34..417 CDD:107388 63/288 (22%)
ANF_receptor 55..398 CDD:279440 58/264 (22%)
PBP2_iGluR_Kainate_GluR7 433..801 CDD:270441 79/435 (18%)
Lig_chan 564..832 CDD:278489 64/320 (20%)
Glutamate binding. /evidence=ECO:0000250 690..692 0/1 (0%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165156185
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.840

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