DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir92a and GRIK1

DIOPT Version :10

Sequence 1:NP_001097845.2 Gene:Ir92a / 42415 FlyBaseID:FBgn0038789 Length:678 Species:Drosophila melanogaster
Sequence 2:NP_001317923.1 Gene:GRIK1 / 2897 HGNCID:4579 Length:949 Species:Homo sapiens


Alignment Length:809 Identity:153/809 - (18%)
Similarity:281/809 - (34%) Gaps:241/809 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 LQPLVMHLSQLLRIIVGQYFAEFPSILIVYNNSASTTPLQLEYLSA-----LELVLREL------ 56
            |.|....:|:.:..:|..|  .:.::.:||.:|.....|| |.:.|     :::.:|:|      
Human   150 LYPDYAAISRAILDLVLYY--NWKTVTVVYEDSTGLIRLQ-ELIKAPSRYNIKIKIRQLPSGNKD 211

  Fly    57 SKPIRLQWINVAFLKDLN---------DLEDQVMGALNSSVTEGFITILSQTHHFIHARYYAT-- 110
            :||:         ||::.         |...:....:...:.  |:.::::.:|:    ::.|  
Human   212 AKPL---------LKEMKKGKEFYVIFDCSHETAAEILKQIL--FMGMMTEYYHY----FFTTLD 261

  Fly   111 ---------RNANVRLKDKRYLFLCEDESP-----AELLCMDILQFYPHHLMVRPGTE------- 154
                     |.:.|.:...|.|.:   ::|     .|...|:.||..|     ||.|.       
Human   262 LFALDLELYRYSGVNMTGFRLLNI---DNPHVSSIIEKWSMERLQAPP-----RPETGLLDGMMT 318

  Fly   155 -----------------------TAPTGPTGPHPDPRRGGGASVSTKNKDDGEGGAG----NKTT 192
                                   |..:.....| .|.|.|...::...:...:|..|    |||.
Human   319 TEAALMYDAVYMVAIASHRASQLTVSSLQCHRH-KPWRLGPRFMNLIKEARWDGLTGHITFNKTN 382

  Fly   193 SPYRDINFELWTQKFVG---AVGNLDALLLDAFLP----------NETFANRVELYPNKLLNLQR 244
            ...:|.:.::.:.|..|   |.|.:...|...:..          |.|.:|: :...|...:|..
Human   383 GLRKDFDLDIISLKEEGTEKAAGEVSKHLYKVWKKIGIWNSNSGLNMTDSNK-DKSSNITDSLAN 446

  Fly   245 RSLLVGSITYVPYTITNYVPAGQGDVDPIHPQWPNRSLTFDGAEANVMKTFCQVHNCHLRVE--- 306
            |:|:|.:|...||.:..     :.|    .|.:.|.  .|:|...:::|....:......|:   
Human   447 RTLIVTTILEEPYVMYR-----KSD----KPLYGND--RFEGYCLDLLKELSNILGFIYDVKLVP 500

  Fly   307 --AYGADNWGGIYDNESSDGMLGDIYEQRVEMAIGCIYNWY--DGITETSHTIARSSVTILGPAP 367
              .|||.|     |....:||:.::.:.|.::|:..:...|  :.:.:.|.......::||...|
Human   501 DGKYGAQN-----DKGEWNGMVKELIDHRADLAVAPLTITYVREKVIDFSKPFMTLGISILYRKP 560

  Fly   368 -APLPSWRTNIMPFNNRAWL-VLISTL-VICGTFLY--FMKYVSYRLR--YSGTQVKFHHSRKLE 425
             ...|...:.:.|.:...|: ||::.| |.|..|:.  |..|..|...  ...:.|..::...|.
Human   561 NGTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLFVIARFTPYEWYNPHPCNPDSDVVENNFTLLN 625

  Fly   426 KSMLDIFALFIQQPSAPLSFDRFAPRFFLATILCA-----TITLENIYSGQLKSMLTFPFYSAPV 485
            .....:.|| :||.|      ...|:.....|:..     |:.:.:.|:..|.:.||.....:|:
Human   626 SFWFGVGAL-MQQGS------ELMPKALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPI 683

  Fly   486 DTIEKWA-QSGWKWSAPSIIWVHTVQSSDLETEQILARNFEVHDY----SYLSN---VSFMPNYG 542
            |:.:..| |:..::.|        |:.....|   ..:..::..|    :::|:   .:.:.|..
Human   684 DSADDLAKQTKIEYGA--------VRDGSTMT---FFKKSKISTYEKMWAFMSSRQQTALVRNSD 737

  Fly   543 FGIERLSSGSLSVGDYVSTEALENRIVLHDDLYFDYTRAVSIRGWILMPELNKHIRTCQET---G 604
            .||:|:.:     .||.         :|.:....:|...                |.|..|   |
Human   738 EGIQRVLT-----TDYA---------LLMESTSIEYVTQ----------------RNCNLTQIGG 772

  Fly   605 LYFHWELEFIDK------------YMDKKKQEVLMDLANG--HKVK-------GAPQ-------A 641
            |        ||.            |.||....:|.....|  |.:|       |.|:       |
Human   773 L--------IDSKGYGVGTPIGSPYRDKITIAILQLQEEGKLHMMKEKWWRGNGCPEEDNKEASA 829

  Fly   642 LDVRNIAGALFVLAFGVAFAGCALVAELL 670
            |.|.||.|...|||.|:..:....:.|.:
Human   830 LGVENIGGIFIVLAAGLVLSVFVAIGEFI 858

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir92aNP_001097845.2 None
GRIK1NP_001317923.1 PBP1_iGluR_Kainate 38..431 CDD:380605 52/307 (17%)
Periplasmic_Binding_Protein_Type_2 446..815 CDD:473866 84/440 (19%)

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