DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir92a and GRID1

DIOPT Version :9

Sequence 1:NP_001097845.2 Gene:Ir92a / 42415 FlyBaseID:FBgn0038789 Length:678 Species:Drosophila melanogaster
Sequence 2:NP_060021.1 Gene:GRID1 / 2894 HGNCID:4575 Length:1009 Species:Homo sapiens


Alignment Length:644 Identity:121/644 - (18%)
Similarity:233/644 - (36%) Gaps:166/644 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    90 EGFITILSQTHHFIHARYYATRNA-NVRLKDKRYLFLCEDESPAELLCMDILQFYPHHLMVRPGT 153
            ||::.:|..::.:::.......|| :.:|:|:::      .|.|.|.|            :|..|
Human   310 EGYLQMLQISNLYLYDSVLMLANAFHRKLEDRKW------HSMASLNC------------IRKST 356

  Fly   154 ETAPTGPTGPHPDPRRGGGASVSTKNKDDGEGGAG-----NKTTSPYRDINFELWTQKFVGAVGN 213
            :            |..||.:.:.|..|....|..|     ..:::||  :.||:....:      
Human   357 K------------PWNGGRSMLDTIKKGHITGLTGVMEFREDSSNPY--VQFEILGTTY------ 401

  Fly   214 LDALLLDAFLPNETFANRVELY----PNKLLN-----------LQRRSLLVGSITYVPYTITNYV 263
                       :|||...:...    ..|.||           ||..:|.|.::...|:.:....
Human   402 -----------SETFGKDMRKLATWDSEKGLNGSLQERPMGSRLQGLTLKVVTVLEEPFVMVAEN 455

  Fly   264 PAGQGDVDPIHPQWPNRSLTFDGAEANVMKTFCQVHNCHLRVEAYGADN--WGGIYDNESSDGML 326
            ..||          |.|   :.|...:|:....:.  ...:.|.|.|.:  :|....|.|.:||:
Human   456 ILGQ----------PKR---YKGFSIDVLDALAKA--LGFKYEIYQAPDGRYGHQLHNTSWNGMI 505

  Fly   327 GDIYEQRVEMAIGC--IYNWYDGITETSHTIARSSVTILGPAPAPLPSWRTNIMPFNNRAWLVLI 389
            |::..:|.::||..  |....:.:.:.|......||.||...|....|..:...||:...|..:.
Human   506 GELISKRADLAISAITITPERESVVDFSKRYMDYSVGILIKKPEEKISIFSLFAPFDFAVWACIA 570

  Fly   390 STLVICGTFLYFMKYVSYRLRYSGTQVKFHHSRKLEKSMLDIFALFIQQPSAPLSFDRFAPRFFL 454
            :.:.:.|..::.:..:......|..|.:...|..|..::..::..|:|| ....|.:..|.|..:
Human   571 AAIPVVGVLIFVLNRIQAVRAQSAAQPRPSASATLHSAIWIVYGAFVQQ-GGESSVNSMAMRIVM 634

  Fly   455 ATILCATITLENIYSGQLKSMLTFPFYSAPVDT---IEKWAQSGWKWSAPSIIWVH--TVQSSDL 514
            .:....|:.:.:.|:..|.:.||......|:.|   :.|..:..:.....|.::.:  ...::.|
Human   635 GSWWLFTLIVCSSYTANLAAFLTVSRMDNPIRTFQDLSKQVEMSYGTVRDSAVYEYFRAKGTNPL 699

  Fly   515 ETEQILA-----------------------RNFEVHDYSYLSNVSFMPNYGFGIERLSSGSLSV- 555
            |.:...|                       |..:..:|::|.:|:.: .|.    .|:....|| 
Human   700 EQDSTFAELWRTISKNGGADNCVSSPSEGIRKAKKGNYAFLWDVAVV-EYA----ALTDDDCSVT 759

  Fly   556 --GDYVSTE----ALENRIVLHDDLYFDYTRAVSIRGWILMPELNKHIRTCQETGLYFHWELEFI 614
              |:.:|::    ||:     |...|.|.              .::.|...|:||     :|:.:
Human   760 VIGNSISSKGYGIALQ-----HGSPYRDL--------------FSQRILELQDTG-----DLDVL 800

  Fly   615 DK----YMDKKKQEVLMDLANGHKVKGAPQALDVRNIAGALFVLAFGVAFAGCALVAEL 669
            .:    :|.:      .||.:....:...::|.:.:.||...:||.|:..|  .|||.|
Human   801 KQKWWPHMGR------CDLTSHASAQADGKSLKLHSFAGVFCILAIGLLLA--CLVAAL 851

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir92aNP_001097845.2 None
GRID1NP_060021.1 Interaction with CBLN1. /evidence=ECO:0000250|UniProtKB:Q61627 21..436 31/174 (18%)
PBP1_iGluR_delta_1 25..423 CDD:107387 29/161 (18%)
ANF_receptor 41..400 CDD:279440 24/121 (20%)
PBP2_iGluR_delta_1 436..806 CDD:270448 75/414 (18%)
Lig_chan 564..841 CDD:278489 52/312 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 930..954
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165155869
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.840

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