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Protein Alignment Ir92a and Grin2a

DIOPT Version :9

Sequence 1:	NP_001097845.2	Gene:	Ir92a / 42415	FlyBaseID:	FBgn0038789	Length:	678	Species:	Drosophila melanogaster
Sequence 2:	NP_036705.3	Gene:	Grin2a / 24409	RGDID:	2737	Length:	1464	Species:	Rattus norvegicus

Alignment Length:	393	Identity:	78/393 - (19%)
Similarity:	150/393 - (38%)	Gaps:	79/393 - (20%)

- Green bases have known domain annotations that are detailed below.

  Fly   319 NESSDGMLGDIYEQRVEMAIGC---------IYNWYDGITET--SHTIARSSVTILGPAPAPLPS 372
            |...:||:|::..||..||:|.         :.::.....||  |..::||:.|:   :|:..
  Rat   490 NNVWNGMIGEVVYQRAVMAVGSLTINEERSEVVDFSVPFVETGISVMVSRSNGTV---SPSAF-- 549

  Fly   373 WRTNIMPFNNRAWLVL-ISTLVICGTFLYFMKY---VSYRLRYSGTQVKFHHSRKLEKSMLDIFA 433
                :.||:...|::: :..|::....::..:|   |.|....:..:.....|..:.|::..::.
  Rat   550 ----LEPFSASVWVMMFVMLLIVSAIAVFVFEYFSPVGYNRNLAKGKAPHGPSFTIGKAIWLLWG 610

  Fly   434 LF------IQQPSAPLSFDRFAPRFFLATILCATITLENIYSGQLKS-MLTFPFYSAPVDTIEKW 491
            |.      :|.|....|....:...|.|.|..|:      |:..|.: |:...|........:|.
  Rat   611 LVFNNSVPVQNPKGTTSKIMVSVWAFFAVIFLAS------YTANLAAFMIQEEFVDQVTGLSDKK 669

  Fly   492 AQSGWKWSAPSIIWVHTVQSSDLETEQILARNFE-VHDYSYLSNVSFMPNYGFGIE----RLSSG 551
            .|....:|.|  ....||.:.  .||:.:..|:. :|.|....|..       |:|    .|.:|
  Rat   670 FQRPHDYSPP--FRFGTVPNG--STERNIRNNYPYMHQYMTRFNQR-------GVEDALVSLKTG 723

  Fly   552 SLSVGDYVSTEALENRIVLHDDLYFDYTRAVSIRGWILMPELNKHIRTCQETGLYFH----WE-- 610
            .|..             .::|....:| :|....|..|:...:.:|......|:...    |:
  Rat   724 KLDA-------------FIYDAAVLNY-KAGRDEGCKLVTIGSGYIFATTGYGIALQKGSPWKRQ 774

  Fly   611 -----LEFI-DKYMDKKKQEVLMDLANGHKVKGAPQALDVRNIAGALFVLAFGVAFAGCALVAEL 669
                 |:|: |..|::.:...|..:.:..|.:.....||:.|:||..::||..:|.:....:.|.
  Rat   775 IDLALLQFVGDGEMEELETLWLTGICHNEKNEVMSSQLDIDNMAGVFYMLAAAMALSLITFIWEH 839

  Fly   670 LIH 672
            |.:
  Rat   840 LFY 842

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.