DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir92a and Grik5

DIOPT Version :9

Sequence 1:NP_001097845.2 Gene:Ir92a / 42415 FlyBaseID:FBgn0038789 Length:678 Species:Drosophila melanogaster
Sequence 2:XP_030098003.1 Gene:Grik5 / 14809 MGIID:95818 Length:1003 Species:Mus musculus


Alignment Length:505 Identity:102/505 - (20%)
Similarity:175/505 - (34%) Gaps:129/505 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   225 NETFA-NRVELYPNKLLNLQRRSLLVGSITYVPYTITNYVPAGQGDVDPIHPQWPN-RSLT---- 283
            |.|.| |...|..|....|..::|:|.:|...||.:..                || ::|:    
Mouse   417 NRTLAMNATTLDINLSQTLANKTLVVTTILENPYVMRR----------------PNFQALSGNER 465

  Fly   284 FDGAEANVMKTFCQVHNCHLRVEAYGADNWGGIYDNESSDGMLGD-IYEQRVEMAIGC--IYNWY 345
            |:|...::::...::.....|:.......:|....|.|..||:|: |..|:.::|:..  |....
Mouse   466 FEGFCVDMLRELAELLRFRYRLRLVEDGLYGAPEPNGSWTGMVGELINRQKADLAVAAFTITAER 530

  Fly   346 DGITETSHTIARSSVTIL-----GPAPAPLPSWRTNIMPFNNRAWL-VLISTLVI-CGTFL---- 399
            :.:.:.|.......::||     |..    |.:.:.:.||:...|| :|::.|.: |..||    
Mouse   531 EKVIDFSKPFMTLGISILYRVHMGRK----PGYFSFLDPFSPAVWLFMLLAYLAVSCVLFLAARL 591

  Fly   400 ----YFMKYVSYRLRYSGTQVKFHHSRKLEKSMLDIFALFIQQPSAPLSFDRFAPRFFLATILCA 460
                ::..:...|.|....:.::    .|..|:......|:||.|      ...||......:..
Mouse   592 SPYEWYNPHPCLRARPHILENQY----TLGNSLWFPVGGFMQQGS------EIMPRALSTRCVSG 646

  Fly   461 -----TITLENIYSGQLKSMLTFPFYSAPVDTIEKWA---------------------------Q 493
                 |:.:.:.|:..|.:.||......||::.:..|                           |
Mouse   647 VWWAFTLIIISSYTANLAAFLTVQRMEVPVESADDLADQTNIEYGTIHAGSTMTFFQNSRYQTYQ 711

  Fly   494 SGWKW---SAPSIIWVHTVQSSDLETEQILARNFEVHDYSYLSNVSFMPNYGFGIERLSSGSLSV 555
            ..|.:   ..||:.    |:|    ||:.:||..... |::|.. |.|..|.   .||:.....:
Mouse   712 RMWNYMQSKQPSVF----VKS----TEEGIARVLNSR-YAFLLE-STMNEYH---RRLNCNLTQI 763

  Fly   556 GDYVSTEALENRIVLHDDLYFDYTRAVSIRGWILMPELNKHIRTCQETGLYFHWELEFIDKYMDK 620
            |..:.|:.....:.|......:.|.|      ||..:.|..:...:..    .||.....|..| 
Mouse   764 GGLLDTKGYGIGMPLGSPFRDEITLA------ILQLQENNRLEILKRK----WWEGGRCPKEED- 817

  Fly   621 KKQEVLMDLANGHKVKGAPQALDVRNIAGALFVLAFGVAFAGCALVAELL 670
                        |:.||    |.:.||.|...||..|:..|....|.|.:
Mouse   818 ------------HRAKG----LGMENIGGIFVVLICGLIIAVFVAVMEFI 851

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir92aNP_001097845.2 None
Grik5XP_030098003.1 PBP1_iGluR_Kainate_KA1_2 23..424 CDD:380616 3/6 (50%)
Periplasmic_Binding_Protein_Type_2 437..808 CDD:419667 78/423 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167846643
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.840

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