DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir92a and Grid2

DIOPT Version :9

Sequence 1:NP_001097845.2 Gene:Ir92a / 42415 FlyBaseID:FBgn0038789 Length:678 Species:Drosophila melanogaster
Sequence 2:NP_032193.1 Gene:Grid2 / 14804 MGIID:95813 Length:1007 Species:Mus musculus


Alignment Length:772 Identity:138/772 - (17%)
Similarity:293/772 - (37%) Gaps:180/772 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 MHLSQLLRIIVGQYFAEFPSILIVYNNSASTTPLQLEYLS---------ALELVLRELSKPI--- 60
            ::|::::..:|.:|  .:...:|.|::......:| |:|.         ||:.|...::|.|   
Mouse   150 VYLNEVILRVVTEY--AWQKFIIFYDSEYDIRGIQ-EFLDKVSQQGMDVALQKVENNINKMITTL 211

  Fly    61 ----RLQWIN------------------------------VAF-------LKDLNDLEDQVMGAL 84
                |::.:|                              |||       .:::||::.|.:  :
Mouse   212 FDTMRIEELNRYRDTLRRAILVMNPATAKSFISEVVETNLVAFDCHWIIINEEINDVDVQEL--V 274

  Fly    85 NSSVTEGFITILSQTH---HFIHARYYATRNANVRLKDKRYLFLCEDESP-AELLCMDILQFYPH 145
            ..|:  |.:||:.||.   ..|..|.:   ..|.|:...    ||:.:.| |:.:.:..|..|..
Mouse   275 RRSI--GRLTIIRQTFPVPQNISQRCF---RGNHRISSS----LCDPKDPFAQNMEISNLYIYDT 330

  Fly   146 HLMV----------RPGTETAPTGPTGPHPDPRRGGGASVSTKNK----------DDGEGGAGNK 190
            .|::          |.....|.......:..|.:||.:.:.|..|          :.||.| ||.
Mouse   331 VLLLANAFHKKLEDRKWHSMASLSCIRKNSKPWQGGRSMLETIKKGGVNGLTGDLEFGENG-GNP 394

  Fly   191 TTSPYRDINFELWTQKFVGAVG-------------NLDALLLDAFLPNETFANRVELYPNKLLNL 242
                  :::||:....:...:|             .|:..|.|..|.|               |:
Mouse   395 ------NVHFEILGTNYGEELGRGVRKLGCWNPVTGLNGSLTDKKLEN---------------NM 438

  Fly   243 QRRSLLVGSITYVPYTITNYVPAGQGDVDPIHPQWPNRSLTFDGAEANVMKTFCQVHNCHLRVEA 307
            :...|.|.::...|:.:.:....|:          |.:   :.|...:|:.........:..:..
Mouse   439 RGVVLRVVTVLEEPFVMVSENVLGK----------PKK---YQGFSIDVLDALSNYLGFNYEIYV 490

  Fly   308 YGADNWGGIYDNESSDGMLGDIYEQRVEMAIGCIYNWYD--GITETSHTIARSSVTILGPAPAPL 370
            .....:|...::.:.:|::|::..:|.::.|..:....|  .:.:.:......||.:|.......
Mouse   491 APDHKYGSPQEDGTWNGLVGELVFKRADIGISALTITPDRENVVDFTTRYMDYSVGVLLRRAEKT 555

  Fly   371 PSWRTNIMPFNNRAWLVLISTLVICGTFLYFMKYVSYRLRYSGTQVKFHHSRKLEKSMLDIFALF 435
            ......:.||:...|..:..|:::.|..:|.:.:::......|:..    |..|..||..::..|
Mouse   556 VDMFACLAPFDLSLWACIAGTVLLVGLLVYLLNWLNPPRLQMGSMT----STTLYNSMWFVYGSF 616

  Fly   436 IQQPSAPLSFDRFAPRFFL-ATILCATITLENIYSGQLKSMLTFPFYSAPVDTIE---KWAQSGW 496
            :|| ...:.:...|.|..: |..|.|.|.:.: |:..|.:.||.....:.:.:::   |.....:
Mouse   617 VQQ-GGEVPYTTLATRMMMGAWWLFALIVISS-YTANLAAFLTITRIESSIQSLQDLSKQTDIPY 679

  Fly   497 KWSAPSIIWVHTVQS--SDLETEQILARNFEVHDYSYLSNVSFMPNYGFGIERLSSGSLSVGDYV 559
            .....|.::.|....  :..|.:.:.::.:.:.:.|..|..:.:.:.. ||:::..|:.:   :|
Mouse   680 GTVLDSAVYQHVRMKGLNPFERDSMYSQMWRMINRSNGSENNVLESQA-GIQKVKYGNYA---FV 740

  Fly   560 STEALENRIVLHD-DLYFDYT--RAVSIRGWILMPE--------LNKHIRTCQETGLYFHWELEF 613
            ...|:...:.::| |..| ||  ..|:.||:.:..:        .::.|...|::|     :::.
Mouse   741 WDAAVLEYVAINDPDCSF-YTVGNTVADRGYGIALQHGSPYRDVFSQRILELQQSG-----DMDI 799

  Fly   614 I-DKYMDKKKQEVLMDLANGHKVKGAPQALDVRNIAGALFVLAFGVAFAGCALVAEL 669
            : .|:..|..|   .||.:....|....|||::::||...:||.|:..:  .|:|.|
Mouse   800 LKHKWWPKNGQ---CDLYSSVDAKQKGGALDIKSLAGVFCILAAGIVLS--CLIAVL 851

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir92aNP_001097845.2 None
Grid2NP_032193.1 Interaction with CBLN1 homotrimer. /evidence=ECO:0000250|UniProtKB:O43424 24..345 38/208 (18%)
Periplasmic_Binding_Protein_type1 28..429 CDD:385651 54/299 (18%)
PBP2_iGluR_delta_2 440..806 CDD:270449 63/394 (16%)
Interaction with AP4M1. /evidence=ECO:0000250|UniProtKB:Q63226 921..991
PDZ-binding 1005..1007
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167846505
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.840

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