DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir92a and Grid1

DIOPT Version :10

Sequence 1:NP_001097845.2 Gene:Ir92a / 42415 FlyBaseID:FBgn0038789 Length:678 Species:Drosophila melanogaster
Sequence 2:NP_032192.2 Gene:Grid1 / 14803 MGIID:95812 Length:1009 Species:Mus musculus


Alignment Length:659 Identity:117/659 - (17%)
Similarity:215/659 - (32%) Gaps:196/659 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    90 EGFITILSQTHHFIHARYYATRNA-NVRLKDKRYLFLCEDESPAELLCMDILQFYPHHLMVRPGT 153
            ||::.:|..::.:::.......|| :.:|:|:::      .|.|.|.|            :|..|
Mouse   310 EGYLQMLQISNLYLYDSVLMLANAFHRKLEDRKW------HSMASLNC------------IRKST 356

  Fly   154 ETAPTGPTGPHPDPRRGGGASVSTKNKDDGEGGAG-----NKTTSPYRDINFELWTQKFVGAVGN 213
            :            |..||.:.:.|..|....|..|     ..:::||  :.||:....:      
Mouse   357 K------------PWNGGRSMLDTIKKGHITGLTGVMEFREDSSNPY--VQFEILGTTY------ 401

  Fly   214 LDALLLDAFLPNETFANRVELY----PNKLLN-----------LQRRSLLVGSITYVPYTITNYV 263
                       :|||...:...    ..|.||           ||..:|.|.::...|:.:....
Mouse   402 -----------SETFGKDMRKLATWDSEKGLNGSLQERPMGSRLQGLTLKVVTVLEEPFVMVAEN 455

  Fly   264 PAGQGDVDPIHPQWPNRSLTFDGAEANVMKTFCQVHNCHLRVEAYGADN--WGGIYDNESSDGML 326
            ..||          |.|   :.|...:|:....:.  ...:.|.|.|.:  :|....|.|.:||:
Mouse   456 ILGQ----------PKR---YKGFSIDVLDALAKA--LGFKYEIYQAPDGRYGHQLHNTSWNGMI 505

  Fly   327 GDIYEQRVEMAIGC--IYNWYDGITETSHTIARSSVTILGPAPAPLPSWRTNIMPFNNRAWLVLI 389
            |::..:|.::||..  |....:.:.:.|......||.||...|....|..:...||:...|..:.
Mouse   506 GELISKRADLAISAITITPERESVVDFSKRYMDYSVGILIKKPEEKISIFSLFAPFDFAVWACIA 570

  Fly   390 STLVICGTFLYFMKYVSYRLRYSGTQVKFHHSRKLEKSMLDIFALFIQQPSAPLSFDRFAPRFFL 454
            :.:.:.|..::.:..:......|.||.:...|..|..::..::..|:|| ....|.:..|.|..:
Mouse   571 AAIPVVGVLIFVLNRIQAVRSQSATQPRPSASATLHSAIWIVYGAFVQQ-GGESSVNSVAMRIVM 634

  Fly   455 ATILCATITLENIYSGQLKSMLTFPFYSAPVDTIEKWAQSGWKWSAPSIIWVHTVQSSDLETEQI 519
            .:....|:.:.:.|:..|.:.||......|:.|.:.                   .|..||....
Mouse   635 GSWWLFTLIVCSSYTANLAAFLTVSRMDNPIRTFQD-------------------LSKQLEMSYG 680

  Fly   520 LARNFEVHDYSYLSNVSFMPNYGFGIERLSSGSLSVGDYVSTEALENRIVLHDDLYFDYTRAVSI 584
            ..|:..|::|....                          .|..||     .|..:.:..|.:|.
Mouse   681 TVRDSAVYEYFRAK--------------------------GTNPLE-----QDSTFAELWRTISK 714

  Fly   585 RGWI--LMPELNKHIRTCQETGLYFHWELEFID-------------------------------K 616
            .|..  .:...::.||..::....|.|::..::                               .
Mouse   715 NGGADNCVSNPSEGIRKAKKGNYAFLWDVAVVEYAALTDDDCSVTVIGNSISSKGYGIALQHGSP 779

  Fly   617 YMDKKKQEVL---------------------MDLANGHKVKGAPQALDVRNIAGALFVLAFGVAF 660
            |.|...|.:|                     .||.:....:...::|.:.:.||...:||.|:..
Mouse   780 YRDLFSQRILELQDTGDLDVLKQKWWPHTGRCDLTSHSSTQTEGKSLKLHSFAGVFCILAIGLLL 844

  Fly   661 AGCALVAEL 669
            |  .|||.|
Mouse   845 A--CLVAAL 851

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir92aNP_001097845.2 None
Grid1NP_032192.2 Interaction with CBLN1. /evidence=ECO:0000269|PubMed:27418511 21..436 31/174 (18%)
PBP1_iGluR_delta_1 25..425 CDD:380615 30/163 (18%)
PBP2_iGluR_delta_1 436..806 CDD:270448 72/435 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 931..960
Blue background indicates that the domain is not in the aligned region.

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