DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir92a and Gria1

DIOPT Version :10

Sequence 1:NP_001097845.2 Gene:Ir92a / 42415 FlyBaseID:FBgn0038789 Length:678 Species:Drosophila melanogaster
Sequence 2:NP_032191.2 Gene:Gria1 / 14799 MGIID:95808 Length:907 Species:Mus musculus


Alignment Length:610 Identity:110/610 - (18%)
Similarity:194/610 - (31%) Gaps:225/610 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   185 GGAGNKTTSPY------RDINFELWTQKFVGAVGNL--------------------DALLL---- 219
            |.||:...:|.      .||...|...:|.|..||:                    |.:..    
Mouse   318 GNAGDCLANPAVPWGQGIDIQRALQQVRFEGLTGNVQFNEKGRRTNYTLHVIEMKHDGIRKIGYW 382

  Fly   220 ---DAFLPNETFANRVELYPNKLLNLQRRSLLVGSITYVPYTITNYVPAGQGDVDPIHPQWPNRS 281
               |.|:|..|.|..    .....::|.|:.:|.:|...||.:..                 ..:
Mouse   383 NEDDKFVPAATDAQA----GGDNSSVQNRTYIVTTILEDPYVMLK-----------------KNA 426

  Fly   282 LTFDGAE----------ANVMKTFCQVHNCHL----RVE-----AYGADNWGGIYDNESSDGMLG 327
            ..|:|.:          |.:.|        |:    |:|     .|||.:    .|.::.:||:|
Mouse   427 NQFEGNDRYEGYCVELAAEIAK--------HVGYSYRLEIVSDGKYGARD----PDTKAWNGMVG 479

  Fly   328 DIYEQRVEMAIGCIYNWYDGITETSHTIARSSVTILGPAPAPLPSWRTNIM-------------- 378
            ::...|.::|:..:          :.|:.|..|....   .|..|...:||              
Mouse   480 ELVYGRADVAVAPL----------TITLVREEVIDFS---KPFMSLGISIMIKKPQKSKPGVFSF 531

  Fly   379 --PFNNRAWLVLISTLVICGTFLYFMKYVSYRLRYSGTQVKFHHSRKLEK--------------- 426
              |.....|:.::...:.....|:.:.      |:|..:   .||.:.|:               
Mouse   532 LDPLAYEIWMCIVFAYIGVSVVLFLVS------RFSPYE---WHSEEFEEGRDQTTSDQSNEFGI 587

  Fly   427 --SMLDIFALFIQQPSAPLSFDRFAPRFFLATILCA-----TITLENIYSGQLKSMLTFPFYSAP 484
              |:......|:||..      ..:||.....|:..     |:.:.:.|:..|.:.||.....:|
Mouse   588 FNSLWFSLGAFMQQGC------DISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSP 646

  Fly   485 VDTIEKWA----------QSG-----------------WKW--SAPSIIWVHTVQSSDLETEQIL 520
            :::.|..|          ::|                 |.:  ||...::|.|.:...:...:..
Mouse   647 IESAEDLAKQTEIAYGTLEAGSTKEFFRRSKIAVFEKMWTYMKSAEPSVFVRTTEEGMIRVRKSK 711

  Fly   521 ARNFEVHDYSYLSNVSFMPNYGFGIE-RLSSGSLSVGDYVSTEALENRIVLHDDLYFDYTRAVSI 584
            .:      |:||.. |.|..|   || |....::.||..:.::.              |..|.. 
Mouse   712 GK------YAYLLE-STMNEY---IEQRKPCDTMKVGGNLDSKG--------------YGIATP- 751

  Fly   585 RGWILMPELNKHIRTCQETGLYFHWELEFIDKYMDKKKQEVLMDL----ANGHKVKGAPQALDVR 645
            :|..|...:|..:....|.||            :||.|.:...|.    :.|...|....||.:.
Mouse   752 KGSALRNPVNLAVLKLNEQGL------------LDKLKNKWWYDKGECGSGGGDSKDKTSALSLS 804

  Fly   646 NIAGALFVLAFGVAFAGCALVAELL 670
            |:||..::|..|:   |.|::..|:
Mouse   805 NVAGVFYILIGGL---GLAMLVALI 826

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir92aNP_001097845.2 None
Gria1NP_032191.2 PBP1_iGluR_AMPA_GluR1 26..392 CDD:380613 15/73 (21%)
PBP2_iGluR_AMPA_GluR1 406..787 CDD:270447 80/474 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 857..881
PDZ-binding 904..907
Blue background indicates that the domain is not in the aligned region.

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