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Protein Alignment Ir92a and Gria1

DIOPT Version :9

Sequence 1:	NP_001097845.2	Gene:	Ir92a / 42415	FlyBaseID:	FBgn0038789	Length:	678	Species:	Drosophila melanogaster
Sequence 2:	NP_001106796.1	Gene:	Gria1 / 14799	MGIID:	95808	Length:	907	Species:	Mus musculus

Alignment Length:	610	Identity:	110/610 - (18%)
Similarity:	195/610 - (31%)	Gaps:	225/610 - (36%)

- Green bases have known domain annotations that are detailed below.

  Fly   185 GGAGNKTTSPY------RDINFELWTQKFVGAVGNL--------------------DALLL---- 219
            |.||:...:|.      .||...|...:|.|..||:                    |.:..
Mouse   318 GNAGDCLANPAVPWGQGIDIQRALQQVRFEGLTGNVQFNEKGRRTNYTLHVIEMKHDGIRKIGYW 382

  Fly   220 ---DAFLPNETFANRVELYPNKLLNLQRRSLLVGSITYVPYTITNYVPAGQGDVDPIHPQWPNRS 281
               |.|:|..|.|..    .....::|.|:.:|.:|...||.:..                 ..:
Mouse   383 NEDDKFVPAATDAQA----GGDNSSVQNRTYIVTTILEDPYVMLK-----------------KNA 426

  Fly   282 LTFDGAE----------ANVMKTFCQVHNCHL----RVE-----AYGADNWGGIYDNESSDGMLG 327
            ..|:|.:          |.:.|        |:    |:|     .|||.:    .|.::.:||:|
Mouse   427 NQFEGNDRYEGYCVELAAEIAK--------HVGYSYRLEIVSDGKYGARD----PDTKAWNGMVG 479

  Fly   328 DIYEQRVEMAIGCIYNWYDGITETSHTIARSSVTILGPAPAPLPSWRTNIM-------------- 378
            ::...|.::|:..:          :.|:.|..|....   .|..|...:||
Mouse   480 ELVYGRADVAVAPL----------TITLVREEVIDFS---KPFMSLGISIMIKKPQKSKPGVFSF 531

  Fly   379 --PFNNRAWLVLISTLVICGTFLYFMKYVSYRLRYSGTQVKFHHSRKLEK--------------- 426
              |.....|:.::...:.....|:.:.      |:|..:   .||.:.|:
Mouse   532 LDPLAYEIWMCIVFAYIGVSVVLFLVS------RFSPYE---WHSEEFEEGRDQTTSDQSNEFGI 587

  Fly   427 --SMLDIFALFIQQPSAPLSFDRFAPRFFLATILCA-----TITLENIYSGQLKSMLTFPFYSAP 484
              |:......|:||..      ..:||.....|:..     |:.:.:.|:..|.:.||.....:|
Mouse   588 FNSLWFSLGAFMQQGC------DISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSP 646

  Fly   485 VDTIEKWA----------QSG-----------------WKW--SAPSIIWVHTVQSSDLETEQIL 520
            :::.|..|          ::|                 |.:  ||...::|.|.:...:...:..
Mouse   647 IESAEDLAKQTEIAYGTLEAGSTKEFFRRSKIAVFEKMWTYMKSAEPSVFVRTTEEGMIRVRKSK 711

  Fly   521 ARNFEVHDYSYLSNVSFMPNYGFGIE-RLSSGSLSVGDYVSTEALENRIVLHDDLYFDYTRAVSI 584
            .:      |:||.. |.|..|   || |....::.||..:.::.              |..|..
Mouse   712 GK------YAYLLE-STMNEY---IEQRKPCDTMKVGGNLDSKG--------------YGIATP- 751

  Fly   585 RGWILMPELNKHIRTCQETGLYFHWELEFIDKYMDKKKQEVLMDLAN-GHKVKGA---PQALDVR 645
            :|..|...:|..:....|.|:            :||.|.:...|... |.|..|:   ..||.:.
Mouse   752 KGSALRGPVNLAVLKLSEQGV------------LDKLKSKWWYDKGECGSKDSGSKDKTSALSLS 804

  Fly   646 NIAGALFVLAFGVAFAGCALVAELL 670
            |:||..::|..|:   |.|::..|:
Mouse   805 NVAGVFYILIGGL---GLAMLVALI 826

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.