DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir92a and GRIN3B

DIOPT Version :10

Sequence 1:NP_001097845.2 Gene:Ir92a / 42415 FlyBaseID:FBgn0038789 Length:678 Species:Drosophila melanogaster
Sequence 2:NP_619635.1 Gene:GRIN3B / 116444 HGNCID:16768 Length:1043 Species:Homo sapiens


Alignment Length:656 Identity:128/656 - (19%)
Similarity:219/656 - (33%) Gaps:210/656 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   116 RLKDKRYLFLCEDESPAELLCMDILQFYPH---HLMVRPGTETAPTGPTGP-------------- 163
            :::.||.|.      ||.:.|.|:....|.   ..:.|....|:..|.|||              
Human   309 QVQPKRALL------PAPVNCGDLQPAGPESPGRFLARFLANTSFQGRTGPVWVTGSSQVHMSRH 367

  Fly   164 ------HPDPRRGGGASVSTKNKDDGE-----GGAGNKTTSPYRDINFELWTQKFVGAVGNLDAL 217
                  ..|| ||..|..:..:..||:     |||..:...|.   ..::|.:  :..|..|:..
Human   368 FKVWSLRRDP-RGAPAWATVGSWRDGQLDLEPGGASARPPPPQ---GAQVWPK--LRVVTLLEHP 426

  Fly   218 LLDAFLPNETFANRVELYPNKLLNLQRRSLLVGSITYVPYTITNYVPAGQGDVDPIHPQWPNRSL 282
            .:.|..|:|                                 ....||||..:||    ..|.|.
Human   427 FVFARDPDE---------------------------------DGQCPAGQLCLDP----GTNDSA 454

  Fly   283 TFD--------GAEANVMKTFCQ----------VHNCHLRVEAY--GADNWGGIYDNESSDGMLG 327
            |.|        |:....::..|.          ..:.....|.|  |...:|.:.|...: |::|
Human   455 TLDALFAALANGSAPRALRKCCYGYCIDLLERLAEDTPFDFELYLVGDGKYGALRDGRWT-GLVG 518

  Fly   328 DIYEQRVEMAIGCIYNWYDGITETSHTIARSSV---------TILG------PAPAPLPSWRTNI 377
            |:...|..||          :|..|...|||.|         |.||      ...:|:.::   :
Human   519 DLLAGRAHMA----------VTSFSINSARSQVVDFTSPFFSTSLGIMVRARDTASPIGAF---M 570

  Fly   378 MPFNNRAWLVLISTLVICGTFLYFMKYVS-YRL--RYSGTQVKFHHSRKLEKSMLDIFALFIQQ- 438
            .|.:...||.:.:.|.:...||...::.| |.|  |.......|.:|..|......:|...:.. 
Human   571 WPLHWSTWLGVFAALHLTALFLTVYEWRSPYGLTPRGRNRSTVFSYSSALNLCYAILFRRTVSSK 635

  Fly   439 ----PSAPLSFDRFAPRFFLATILCATITLENIYSGQLKSML----TFPFYSAPVDTIEKWAQSG 495
                |:..|..:.:|       |.|..:.  :.|:..|.:::    ||...|...|........|
Human   636 TPKCPTGRLLMNLWA-------IFCLLVL--SSYTANLAAVMVGDKTFEELSGIHDPKLHHPAQG 691

  Fly   496 WKWSAPSIIWVHTVQSSDLETEQILARNF-EVHDYSYLSNVSFMPNYGFGIERLSSGSLSVGDYV 559
            :::..   :|    :||   .|..:.::| ::|.:....:....|.   |:..|:|....:..::
Human   692 FRFGT---VW----ESS---AEAYIKKSFPDMHAHMRRHSAPTTPR---GVAMLTSDPPKLNAFI 743

  Fly   560 STEALENRIVLHDDLYFDYTRAV-------------SIRGW-ILMPE-------LNKHIRTCQET 603
            ..::|           .||..::             :|.|: |.:|:       |::.|...:.:
Human   744 MDKSL-----------LDYEVSIDADCKLLTVGKPFAIEGYGIGLPQNSPLTSNLSEFISRYKSS 797

  Fly   604 GLYFHWELEFIDKYMDKKKQEVLMDLANGHKVKGAPQAL--DVRNIAGALFVLAFGVAFAGCALV 666
            |        |||...||..:.|    ..|.:|....:.|  .:.:.||...:|..|:   |.||:
Human   798 G--------FIDLLHDKWYKMV----PCGKRVFAVTETLQMSIYHFAGLFVLLCLGL---GSALL 847

  Fly   667 AELLIH 672
            :.|..|
Human   848 SSLGEH 853

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir92aNP_001097845.2 None
GRIN3BNP_619635.1 PBP1_iGluR_NMDA_NR3 29..401 CDD:380600 22/98 (22%)
PBP2_iGluR_NMDA_Nr3 415..808 CDD:270438 89/486 (18%)
Lig_chan 574..841 CDD:459656 57/311 (18%)

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