DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir92a and LOC110438919

DIOPT Version :9

Sequence 1:NP_001097845.2 Gene:Ir92a / 42415 FlyBaseID:FBgn0038789 Length:678 Species:Drosophila melanogaster
Sequence 2:XP_021328141.1 Gene:LOC110438919 / 110438919 -ID:- Length:1417 Species:Danio rerio


Alignment Length:698 Identity:135/698 - (19%)
Similarity:242/698 - (34%) Gaps:155/698 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    75 DLEDQVMGALNSSVTEG---FITILSQTHHFIHARYYATRNAN--------VRLKDKRYLFLC-- 126
            :||:.::  |:.||.:|   ...:|.:....:...|.....||        |.|....|.::.  
Zfish    57 ELEEVLL--LDMSVDDGDAKIQNLLKKLQSPVILLYSTKEEANIIFQVAHSVGLTGYGYTWIVPS 119

  Fly   127 -----EDESPAE----LLCMDILQF-YPHHLMVRPGTETAPTGPT------GPH----------P 165
                 .|..|||    ::.:...:: |.....||.|.....|..:      |||          |
Zfish   120 LVAGDADHIPAEFPTGMISVSYDEWDYGLEARVRDGVAVIATATSTMMMDRGPHTLLKSECHGAP 184

  Fly   166 DPRRGGGASVSTKNKDDGEGGAGNKTTSPYRDINFELWTQKFVGAVGNLDALLLDAFLPNETFAN 230
            |             |.....|..|:......::.||.....|......:...|:...|..|...:
Zfish   185 D-------------KKSPMTGNNNEVLRYLMNVTFEGRNLSFSEDGYQMHPKLVIILLDKERQWD 236

  Fly   231 RVELYPNKLLNLQ-----RRSLLVG------------SITYVPYTITNYVPAGQGDVDPI----- 273
            ||..:.|..|:::     |..|..|            ::...|:.|..       ||||:     
Zfish   237 RVGKWENGSLSMKYHVWPRFELYSGPEAREDDHLSIVTLEEAPFVIVE-------DVDPLSGTCM 294

  Fly   274 ------HPQWPNRSLTFDGAE--ANVMKTFC------QVHNCHLRVEAYGADNW-GGIYDNESSD 323
                  ..|....:.|.|.|.  ....|.||      ...|.....:.|...|. .|...|.:.:
Zfish   295 RNTVPCRKQLKALNQTQDSAVYIKRCCKGFCIDILKKIAKNVKFTYDLYLVTNGKHGKKINGTWN 359

  Fly   324 GMLGDIYEQRVEMAIGCIYNWYDGITETSHTIARSSVTILGPAPAPLPSWRTN--------IMPF 380
            ||:|::..:...||:|.:     .|.|....:...||..:....:.:.| |:|        :.||
Zfish   360 GMVGEVVLKNAHMAVGSL-----TINEERSEVIDFSVPFIETGISVMVS-RSNGTVSPSAFLEPF 418

  Fly   381 NNRAWLVL-ISTLVICGTFLYFMKY---VSYRLRYSGTQVKFHHSRKLEKSMLDIFALF------ 435
            :...|::: :..|::....::..:|   |.|....:..:.....|..:.|::..::.|.      
Zfish   419 SADVWIMMFVMLLLVSAIAVFIFEYFSPVGYNRCLADGREAGGPSFTIGKAIWLLWGLVFNNSVP 483

  Fly   436 IQQPSAPLSFDRFAPRFFLATILCATITLENIYSGQLKSMLTFPFYSAPVDTI----EKWAQSGW 496
            :|.|....|....:...|.|.|..|:.|         .::..|......||.:    :|..|:..
Zfish   484 VQNPRGTTSKIMVSVWAFFAVIFLASYT---------ANLAAFMIQEEYVDQVSGLSDKKFQNPN 539

  Fly   497 KWSAPSIIWVHTVQSSDLETEQILARNF-EVHDYSYLSNVSF-MPNYGFGIERLSSGSLSVGDYV 559
            .:|.|  ....||.:.  .||:.:..|: ::|.|.    |.| ..|....:|.|.:|.|..  ::
Zfish   540 DFSPP--FRFGTVPNG--STERNIRNNYRDMHSYM----VKFHQRNVVEALESLKTGKLDA--FI 594

  Fly   560 STEALENRIVLHDDLYFDYTRAVSIRGWILMPELNKHIRTCQETGLYFHWELEFIDKYMDKKKQE 624
            ...|:.|.:...|    :..:.|:|....:.......|...:::|.....:|..:..:.|.:.:|
Zfish   595 YDAAVLNYMAGRD----EGCKLVTIGSGKVFASTGYGIAIQKDSGWKRQVDLAILQLFGDGEMEE 655

  Fly   625 V----LMDLANGHKVKGAPQALDVRNIAGALFVLAFGVAFAGCALVAE 668
            :    |..:.:..|.:.....|||.|:||..::|...:|.:....:||
Zfish   656 LEALWLTGICHHEKNEVMSSQLDVDNMAGVFYMLGAAMALSLITFIAE 703

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir92aNP_001097845.2 None
LOC110438919XP_021328141.1 PBP1_iGluR_NMDA_NR2 <1..255 CDD:107373 40/212 (19%)
PBP2_iGluR_NMDA_Nr2 267..667 CDD:270436 81/435 (19%)
DUF4013 <389..478 CDD:315788 15/89 (17%)
NMDAR2_C 704..1417 CDD:313729 135/698 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170591423
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.840

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