DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4360 and ZNF254

DIOPT Version :10

Sequence 1:NP_650879.1 Gene:CG4360 / 42413 FlyBaseID:FBgn0038787 Length:556 Species:Drosophila melanogaster
Sequence 2:NP_975011.3 Gene:ZNF254 / 9534 HGNCID:13047 Length:659 Species:Homo sapiens


Alignment Length:442 Identity:136/442 - (30%)
Similarity:182/442 - (41%) Gaps:122/442 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   134 VVDDPRKKKQCHVCKNKFRQLTTLRNHMKIHTDERPYKCKHCDKAFRQISTLTNHVKIHTGEKPF 198
            ::....|..:|..|...|...:||..|.||||.::||||:.|.|||...||||.|.::||||||:
Human   286 IIHTGEKPYKCEECGKAFIWSSTLTEHKKIHTRKKPYKCEECGKAFIWSSTLTRHKRMHTGEKPY 350

  Fly   199 TCNICAKDFRQQSTLINHIKTHKAAESSTPTSLLNYQPQTGSGKHRKSQMHQAYQQ-----QHQR 258
            .|..|.|.|.|.|||..|...|                 ||..:::..:..:|::|     .|:.
Human   351 KCEECGKAFSQSSTLTTHKIIH-----------------TGEKRYKCLECGKAFKQLSTLTTHKI 398

  Fly   259 VQISKTLYS--------GSYSSPAAEELV----KPFQCSVCKRRFPQLSTLHNHERTHIDPKPYK 311
            :.:.:.||.        ...|:....:::    ||::|..|.:.|...|||..|:|.|...||||
Human   399 IHVGEKLYKCEECGKGFNRSSNLTTHKIIHTGEKPYKCEECGKAFIWSSTLTKHKRIHTREKPYK 463

  Fly   312 CETCDKSFSQLATLANHKKIHTGDKPYTCSYCHMQFRQQSTLTNHLKTHTHQIAPGGVGGAGGGG 376
            ||.|.|:|...:||..||::|||:|||.|..|...|.|.||||.|...||               
Human   464 CEECGKAFIWSSTLTRHKRMHTGEKPYKCEECGKSFSQSSTLTTHKIIHT--------------- 513

  Fly   377 GAVTATVDHSMPAPLAPGTQQLTSGLLPNNLH--GSTAN-IIQLDHHPLLHFLDGSTTVSSVVAT 438
                                    |..|....  |...| ...|..|.::|              
Human   514 ------------------------GEKPYKCEECGKAFNWSSTLTKHKIIH-------------- 540

  Fly   439 AAANTKVEHFQAGGSPSGRMTVVGTINMLKGDNPDRPFGCSVCQRFFSQQSTLVNHIKTHTGEKP 503
                                            ..::|:.|..|.:.|.|.|.|.||.:.||||||
Human   541 --------------------------------TEEKPYKCEKCGKAFKQSSILTNHKRIHTGEKP 573

  Fly   504 YKCKICEVNFRQVATLNNHMKIHTGEKPYNCSFCPKQFRQKSTLQNHLRVHT 555
            |||:.|..:|.:.:|...|..||||.|||.|..|.|.|...|||..|.|:||
Human   574 YKCEECGKSFNRSSTFTKHKVIHTGVKPYKCEECGKAFFWSSTLTKHKRIHT 625

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4360NP_650879.1 C2H2 Zn finger 144..164 CDD:275368 7/19 (37%)
zf-H2C2_2 157..181 CDD:463886 14/23 (61%)
C2H2 Zn finger 172..192 CDD:275368 10/19 (53%)
C2H2 Zn finger 200..220 CDD:275368 9/19 (47%)
zf-C2H2_8 281..366 CDD:464935 40/84 (48%)
C2H2 Zn finger 284..304 CDD:275368 8/19 (42%)
C2H2 Zn finger 312..332 CDD:275368 9/19 (47%)
zf-H2C2_2 325..349 CDD:463886 12/23 (52%)
C2H2 Zn finger 340..360 CDD:275368 9/19 (47%)
C2H2 Zn finger 478..498 CDD:275368 8/19 (42%)
C2H2 Zn finger 506..526 CDD:275368 5/19 (26%)
zf-H2C2_2 519..543 CDD:463886 12/23 (52%)
C2H2 Zn finger 534..554 CDD:275368 9/19 (47%)
ZNF254NP_975011.3 KRAB 13..73 CDD:214630
C2H2 Zn finger 184..204 CDD:275368
C2H2 Zn finger 212..260 CDD:275368
COG5048 264..625 CDD:227381 134/440 (30%)
C2H2 Zn finger 268..288 CDD:275368 0/1 (0%)
C2H2 Zn finger 296..316 CDD:275368 7/19 (37%)
C2H2 Zn finger 324..344 CDD:275368 10/19 (53%)
C2H2 Zn finger 352..372 CDD:275368 9/19 (47%)
C2H2 Zn finger 380..400 CDD:275368 3/19 (16%)
C2H2 Zn finger 408..428 CDD:275368 1/19 (5%)
C2H2 Zn finger 436..456 CDD:275368 8/19 (42%)
C2H2 Zn finger 464..484 CDD:275368 9/19 (47%)
C2H2 Zn finger 492..512 CDD:275368 9/19 (47%)
C2H2 Zn finger 520..540 CDD:275368 4/19 (21%)
C2H2 Zn finger 548..568 CDD:275368 8/19 (42%)
C2H2 Zn finger 576..596 CDD:275368 5/19 (26%)
C2H2 Zn finger 604..624 CDD:275368 9/19 (47%)
C2H2 Zn finger 632..652 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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