DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4360 and znf296

DIOPT Version :9

Sequence 1:NP_650879.1 Gene:CG4360 / 42413 FlyBaseID:FBgn0038787 Length:556 Species:Drosophila melanogaster
Sequence 2:NP_001037784.1 Gene:znf296 / 553232 ZFINID:ZDB-GENE-050419-201 Length:636 Species:Danio rerio


Alignment Length:566 Identity:127/566 - (22%)
Similarity:197/566 - (34%) Gaps:171/566 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    92 PLVHLLDISTTTANSGGGGGGS------HTPISPMKQEVQSVISEEEVVVDDPRKKKQCHVCKNK 150
            ||.|:|:.   ..:..||.|.:      |||.||..:.||         .....|.:..:|   :
Zfish    55 PLAHILNF---IQHKQGGCGTARARPQGHTPPSPASRTVQ---------CSQGTKVEAGYV---E 104

  Fly   151 FRQLTTLRNHMKIHTDERPYKCKHCDKAFRQISTLTNHVKIHTGEKP--FTCNICAKDFRQQSTL 213
            .|::|                    |:.:::...:  .|:.:..|:|  |||.:|...|.....|
Zfish   105 LRRVT--------------------DRRWKEEPGV--RVEANRAEEPSVFTCQVCQCVFSSAWNL 147

  Fly   214 INHIK-THKA---AESSTPTSLLNYQPQTG------SGKHRKSQMHQAYQQQHQRVQISKTLYSG 268
            :.|.: ||..   .|..|||       ||.      ..:|..:.:..|:|....|   |...:..
Zfish   148 LQHAQITHSLNIYQEDDTPT-------QTSKPAAMMDPRHLGAALATAFQPSSLR---SARPHKP 202

  Fly   269 SYSSPAAEELVKPFQCSVCKRRFPQLSTLHNHERTHIDPKP----------------YKCETCDK 317
            ..||......::....|:|.:|..::|...........|.|                :.||.|.:
Zfish   203 PPSSTHVPRDLQGLNFSMCLQRLAEVSCSSGGVVPSPSPSPPAASPFPHSTPSIHTAFSCEMCGQ 267

  Fly   318 SFSQLATLANHKKIHTGDKPYTCSYCHMQFRQQSTLTNHLKTHTHQIAPGGVGGAGGGGGAVTAT 382
            .|..|.:|:.|::.|..|:||.|..|.:.|.|...|..|:::|....|           |..|  
Zfish   268 GFQSLRSLSAHRRTHACDRPYHCGLCQLTFSQSGELARHMRSHRRSAA-----------GQET-- 319

  Fly   383 VDHSMPAPLAPGTQQLTSGLLPNNLHGSTANIIQLDHHPLLHFLDGSTTVSSVVATAAAN----- 442
               |.|:|.:....:..||...|::.|.....::...||     .|::.:...:.|.||:     
Zfish   320 ---SDPSPASADEDRKLSGPGDNDISGGHGGSLEAGKHP-----GGASLILMPLQTRAADRNLLR 376

  Fly   443 ---TKVEHFQAG--------GSP------------SGRMTVV-GTINMLKGDNPDRPFG------ 477
               .:||....|        |||            ||...:. |.....:.:..|||.|      
Zfish   377 YYQREVEEEVQGEPQQPSPYGSPSEGSLESGDTGGSGESGIASGNCTPKRPEREDRPQGDWEQEV 441

  Fly   478 ------------------------------CSVCQRFFSQQSTLVNHIKTHTGEKPYKCKICEVN 512
                                          |..|.:.|...|.|..|.::||||:||:|.:|...
Zfish   442 EAVEIVQDWQRENERRQVTNGMGKKKKEEACEFCGKCFRNSSNLTVHRRSHTGERPYRCGLCSYA 506

  Fly   513 FRQVATLNNHMKIHTG---EKPYNCSFCPKQFRQKSTLQNHL-RVH 554
            ..|.:.|..|||.|..   ..|:.|..|...|...:||:.|| :||
Zfish   507 CAQSSKLTRHMKTHGARGTRAPFQCQLCSVPFTVYATLEKHLKKVH 552

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4360NP_650879.1 C2H2 Zn finger 144..164 CDD:275368 3/19 (16%)
zf-H2C2_2 157..181 CDD:290200 1/23 (4%)
C2H2 Zn finger 172..192 CDD:275368 2/19 (11%)
zf-H2C2_2 185..209 CDD:290200 8/25 (32%)
C2H2 Zn finger 200..220 CDD:275368 5/20 (25%)
C2H2 Zn finger 284..304 CDD:275368 4/19 (21%)
zf-C2H2_8 287..363 CDD:292531 23/91 (25%)
C2H2 Zn finger 312..332 CDD:275368 7/19 (37%)
C2H2 Zn finger 340..360 CDD:275368 6/19 (32%)
C2H2 Zn finger 478..498 CDD:275368 6/19 (32%)
zf-H2C2_2 491..515 CDD:290200 10/23 (43%)
C2H2 Zn finger 506..526 CDD:275368 7/19 (37%)
zf-H2C2_2 519..543 CDD:290200 9/26 (35%)
C2H2 Zn finger 534..554 CDD:275368 7/20 (35%)
znf296NP_001037784.1 C2H2 Zn finger 262..282 CDD:275368 7/19 (37%)
zf-C2H2 288..310 CDD:278523 7/21 (33%)
C2H2 Zn finger 290..310 CDD:275368 6/19 (32%)
C2H2 Zn finger 472..492 CDD:275368 6/19 (32%)
zf-C2H2 472..492 CDD:278523 6/19 (32%)
zf-H2C2_2 484..509 CDD:290200 10/24 (42%)
C2H2 Zn finger 500..520 CDD:275368 7/19 (37%)
C2H2 Zn finger 531..549 CDD:275368 6/17 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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