DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4360 and Zfp874b

DIOPT Version :10

Sequence 1:NP_650879.1 Gene:CG4360 / 42413 FlyBaseID:FBgn0038787 Length:556 Species:Drosophila melanogaster
Sequence 2:NP_001333357.1 Gene:Zfp874b / 498682 RGDID:1566325 Length:448 Species:Rattus norvegicus


Alignment Length:452 Identity:122/452 - (26%)
Similarity:162/452 - (35%) Gaps:153/452 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   125 QSVIS--EEEVVVDDPRKKKQCHVCKNKFRQLTTLRNHMKIHTDERPYKCKHCDKAFRQISTLTN 187
            ||.:|  :...:.|.|.|.|:||   ......::|..|.|.||||:.|||:.|.|.|.:.|.|.:
  Rat   121 QSTLSIRQRRYIGDKPYKCKECH---KTLSSRSSLLIHQKYHTDEKTYKCEECGKQFLRSSHLQH 182

  Fly   188 HVKIHTGEKPFTCNICAKDFRQQSTLINHIKTHKAAESSTPTSLLNYQPQTGSGKHR-----KSQ 247
            |.||||||||:.|..|.|.|...|.|..|...|                 ||...::     .|.
  Rat   183 HQKIHTGEKPYKCEDCHKAFLHHSYLRKHQAVH-----------------TGEKPYKCEECGNSF 230

  Fly   248 MHQAYQQQHQRVQ--------------ISKTLYSGSYSSPAAEELVKPFQCSVCKRRFPQLSTLH 298
            .:.|..:||||:.              .|...:...:....:.|  |.:||..|.:.|...|.|.
  Rat   231 YYPAMLKQHQRIHSGEKPDKCEECGKVFSSAFFLNQHKGIDSRE--KRYQCLECGKSFCYRSYLR 293

  Fly   299 NHERTHIDPKPYKCETCDKSFSQLATLANHKKIHTGDKPYTCSYCHMQFRQQSTLTNHLKTHTHQ 363
            .|.|.|....|||||.|.|.||:.:.|..|:.||||.|||:|..|...|   |:||:        
  Rat   294 EHYRRHSGEYPYKCEECGKGFSRSSKLQEHQTIHTGVKPYSCEECGKCF---SSLTS-------- 347

  Fly   364 IAPGGVGGAGGGGGAVTATVDHSMPAPLAPGTQQLTSGLLPNNLHGSTANIIQLDHHPLLHFLDG 428
                                                                 |..|.::|    
  Rat   348 -----------------------------------------------------LKRHQVIH---- 355

  Fly   429 STTVSSVVATAAANTKVEHFQAGGSPSGRMTVVGTINMLKGDNPDRPFGCSVCQRFFSQQSTLVN 493
                                                      :.|.|..|..|.:.||..|.|..
  Rat   356 ------------------------------------------SEDTPHECGKCGKKFSSSSRLQE 378

  Fly   494 HIKTHTGEKPYKCKICEVNFRQVATLNNHMKIHTGEKPYNCSFCPKQFRQKSTLQNHLRVHT 555
            |.|.||.||||||:.|...|...:.|..|..:||.||||.|..|.|.:...::|:.|..:|:
  Rat   379 HQKIHTEEKPYKCEDCHKAFLYHSFLRRHKAVHTREKPYKCEECGKCYTSFTSLKRHQTLHS 440

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4360NP_650879.1 C2H2 Zn finger 144..164 CDD:275368 5/19 (26%)
zf-H2C2_2 157..181 CDD:463886 13/23 (57%)
C2H2 Zn finger 172..192 CDD:275368 8/19 (42%)
C2H2 Zn finger 200..220 CDD:275368 7/19 (37%)
zf-C2H2_8 281..366 CDD:464935 33/84 (39%)
C2H2 Zn finger 284..304 CDD:275368 7/19 (37%)
C2H2 Zn finger 312..332 CDD:275368 8/19 (42%)
zf-H2C2_2 325..349 CDD:463886 12/23 (52%)
C2H2 Zn finger 340..360 CDD:275368 6/19 (32%)
C2H2 Zn finger 478..498 CDD:275368 8/19 (42%)
C2H2 Zn finger 506..526 CDD:275368 5/19 (26%)
zf-H2C2_2 519..543 CDD:463886 11/23 (48%)
C2H2 Zn finger 534..554 CDD:275368 5/19 (26%)
Zfp874bNP_001333357.1 KRAB 5..61 CDD:214630
C2H2 Zn finger 112..131 CDD:275368 3/9 (33%)
COG5048 <136..351 CDD:227381 82/300 (27%)
C2H2 Zn finger 139..159 CDD:275368 6/22 (27%)
C2H2 Zn finger 167..187 CDD:275368 8/19 (42%)
C2H2 Zn finger 195..215 CDD:275368 7/19 (37%)
C2H2 Zn finger 223..243 CDD:275368 6/19 (32%)
C2H2 Zn finger 251..267 CDD:275368 1/15 (7%)
C2H2 Zn finger 279..299 CDD:275368 7/19 (37%)
C2H2 Zn finger 307..327 CDD:275368 8/19 (42%)
C2H2 Zn finger 335..355 CDD:275368 8/83 (10%)
C2H2 Zn finger 363..383 CDD:275368 8/19 (42%)
SFP1 <385..442 CDD:227516 22/56 (39%)
C2H2 Zn finger 391..411 CDD:275368 5/19 (26%)
C2H2 Zn finger 419..439 CDD:275368 5/19 (26%)
Blue background indicates that the domain is not in the aligned region.

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