Protein Alignment CG4360 and jim

DIOPT Version :9

• Sequence 1: NP_650879.1
• Gene: CG4360 / 42413
• FlyBaseID: FBgn0038787
• Length: 556
• Species: Drosophila melanogaster
• Sequence 2: NP_001262221.1
• Gene: jim / 43924
• FlyBaseID: FBgn0027339
• Length: 938
• Species: Drosophila melanogaster
• Alignment Length: 654
• Identity: 147/654 - (22%)
• Similarity: 192/654 - (29%)
• Gaps: 338/654 - (51%)

  Fly    18 HY----QLPASHGGGGGGGGGG---------------------------GGGGGSNGGSGPGPNS 51
            ||    .||....|||||.|||                           .||.|:||..|.|..:
  Fly   229 HYLNKGVLPMEQSGGGGGAGGGEAYALPEMLPAQQNGQQNAGPANTNANEGGAGANGSGGVGGAT 293

  Fly    52 GQQQPTTLASLQQSPFALHQLTAVQAIQHPTHQAMLHPQHPLVHLLDISTTTANSGGGGGGSHTP 116
            |..                                          :.:.:....|||..|..  |
  Fly   294 GAS------------------------------------------VGVGSVGVTSGGRTGNG--P 314

  Fly   117 ISPMKQEVQSVISEEEVVVDDPRKKKQCHVCKNKFRQLTTLRNHMKIHTDERPYKCKHCDKAFRQ 181
            ..|.|.:..|          |.|..| |..|...|:|.:||..|.:||||.||:.|..|.|.|||
  Fly   315 GRPHKNKPHS----------DLRLFK-CLTCGKDFKQKSTLLQHDRIHTDARPFPCSECGKRFRQ 368

  Fly   182 ISTLTNHVKIHTGEKPFTCNICAKDFRQQSTLINHIKTHKAAESSTPTSLLNYQPQTGSGKHRKS 246
            .|.||.|::||..||||||..|::.|||::.|..||:.|                   ||:
  Fly   369 QSHLTQHLRIHANEKPFTCPYCSRSFRQRAILNQHIRIH-------------------SGE---- 410

  Fly   247 QMHQAYQQQHQRVQISKTLYSGSYSSPAAEELVKPFQCSVCKRRFPQLSTLHNHERTHIDPKPY- 310
                                             |||.|..|.:.|.|.:.|:.|.|||.|..|:
  Fly   411 ---------------------------------KPFACPECGKHFRQKAILNQHVRTHQDVSPHL 442

  Fly   311 ----------------------------------------------------------------- 310
                                                                             
  Fly   443 IFKNGPHPTLWPSDVPFPGEDNDTKGDIAGTGGGYHDEDSQGTPDGSGGMHYPSYFKDGKGQKIL 507

  Fly   311 ------------------KCETCDKSFSQLATLANHKKIHTGDKPYTCSYCHMQFRQQSTLTNHL 357
                              :|..|||.|.|..||..|..||...:||.|..|..:|||||.||.||
  Fly   508 PEVLQHIGVRPANMPLYVRCPICDKEFKQKTTLLQHGCIHIESRPYPCPECGKRFRQQSHLTQHL 572

  Fly   358 KTHTHQIAPGGVGGAGGGGGAVTATVDHSMPAPLAPGTQQLTSGLLPNNLHGSTANIIQLDHHPL 422
            :.||:
  Fly   573 RIHTN------------------------------------------------------------ 577

  Fly   423 LHFLDGSTTVSSVVATAAANTKVEHFQAGGSPSGRMTVVGTINMLKGDNPDRPFGCSVCQRFFSQ 487
                                                              ::||||..|.|||.|
  Fly   578 --------------------------------------------------EKPFGCMYCPRFFRQ 592

  Fly   488 QSTLVNHIKTHTGEKPYKCKICEVNFRQVATLNNHMKIHTGEKPYNCSF--CPKQFRQKSTLQNH 550
            ::.|..|::.|||||||||..|..:|||.|.|:.|.:.|.|::|:.|..  |.::|..::.:..|
  Fly   593 RTILNQHLRIHTGEKPYKCGQCGKDFRQKAILDQHTRTHQGDRPFCCPMPNCRRRFATENEVTKH 657

  Fly   551 LRVH 554
            :..|
  Fly   658 IDNH 661

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG4360	NP_650879.1	C2H2 Zn finger	144..164	CDD:275368	7/19 (37%)
		zf-H2C2_2	157..181	CDD:290200	12/23 (52%)
		C2H2 Zn finger	172..192	CDD:275368	10/19 (53%)
		zf-H2C2_2	185..209	CDD:290200	13/23 (57%)
		C2H2 Zn finger	200..220	CDD:275368	8/19 (42%)
		C2H2 Zn finger	284..304	CDD:275368	7/19 (37%)
		zf-C2H2_8	287..363	CDD:292531	36/159 (23%)
		C2H2 Zn finger	312..332	CDD:275368	9/19 (47%)
		C2H2 Zn finger	340..360	CDD:275368	11/19 (58%)
		C2H2 Zn finger	478..498	CDD:275368	8/19 (42%)
		zf-H2C2_2	491..515	CDD:290200	13/23 (57%)
		C2H2 Zn finger	506..526	CDD:275368	8/19 (42%)
		zf-H2C2_2	519..543	CDD:290200	8/25 (32%)
		C2H2 Zn finger	534..554	CDD:275368	4/21 (19%)
jim	NP_001262221.1	C2H2 Zn finger	331..351	CDD:275368	7/19 (37%)
		COG5048	355..666	CDD:227381	105/473 (22%)
		zf-C2H2	357..379	CDD:278523	10/21 (48%)
		C2H2 Zn finger	359..379	CDD:275368	10/19 (53%)
		zf-H2C2_2	371..396	CDD:290200	13/24 (54%)
		C2H2 Zn finger	387..407	CDD:275368	8/19 (42%)
		zf-H2C2_2	400..424	CDD:290200	12/79 (15%)
		C2H2 Zn finger	415..435	CDD:275368	7/19 (37%)
		C2H2 Zn finger	527..547	CDD:275368	9/19 (47%)
		zf-C2H2	553..575	CDD:278523	12/21 (57%)
		C2H2 Zn finger	555..575	CDD:275368	11/19 (58%)
		C2H2 Zn finger	583..603	CDD:275368	8/19 (42%)
		zf-H2C2_2	596..620	CDD:290200	13/23 (57%)
		C2H2 Zn finger	611..631	CDD:275368	8/19 (42%)
		zf-H2C2_2	624..650	CDD:290200	8/25 (32%)
		C2H2 Zn finger	639..661	CDD:275368	4/21 (19%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45471436
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	1	0.930