DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4360 and CG6808

DIOPT Version :9

Sequence 1:NP_650879.1 Gene:CG4360 / 42413 FlyBaseID:FBgn0038787 Length:556 Species:Drosophila melanogaster
Sequence 2:NP_001247055.1 Gene:CG6808 / 41394 FlyBaseID:FBgn0037921 Length:375 Species:Drosophila melanogaster


Alignment Length:195 Identity:55/195 - (28%)
Similarity:78/195 - (40%) Gaps:56/195 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   170 YKCKHCDKAFRQISTLTNHVKIHTGEKPFTCNICAKDFRQQSTLINHIKTHKAAESSTPTSLLNY 234
            |:||.|...:|.:|.|..|.::|..||...|.:|.|.||....|..|::||              
  Fly   227 YRCKICSNTYRCLSQLNAHSQVHRKEKDHQCEVCQKTFRAACNLKTHMRTH-------------- 277

  Fly   235 QPQTGSGKHRKSQMHQAYQQQHQRVQISKTLYSGSYSSPAAEELVKPFQCSVCKRRFPQLSTLHN 299
               ||.                                       ||:||..|.|||...||...
  Fly   278 ---TGE---------------------------------------KPYQCCYCSRRFADNSTHRK 300

  Fly   300 HERTHIDPKPYKCETCDKSFSQLATLANHKKIHTGDKPYTCSYCHMQFRQQSTLTNHLKTHTHQI 364
            |||.|.:.:||.|..|.|:||..::...|..:|:.:|.:.|..|..:||.:..||.|.|:..|::
  Fly   301 HERLHTNERPYACNICGKTFSLSSSRNAHYYLHSSEKSHKCLMCKKEFRLKHQLTAHEKSLAHRL 365

  Fly   365  364
              Fly   366  365

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4360NP_650879.1 C2H2 Zn finger 144..164 CDD:275368
zf-H2C2_2 157..181 CDD:290200 4/10 (40%)
C2H2 Zn finger 172..192 CDD:275368 7/19 (37%)
zf-H2C2_2 185..209 CDD:290200 9/23 (39%)
C2H2 Zn finger 200..220 CDD:275368 7/19 (37%)
C2H2 Zn finger 284..304 CDD:275368 10/19 (53%)
zf-C2H2_8 287..363 CDD:292531 28/75 (37%)
C2H2 Zn finger 312..332 CDD:275368 6/19 (32%)
C2H2 Zn finger 340..360 CDD:275368 8/19 (42%)
C2H2 Zn finger 478..498 CDD:275368
zf-H2C2_2 491..515 CDD:290200
C2H2 Zn finger 506..526 CDD:275368
zf-H2C2_2 519..543 CDD:290200
C2H2 Zn finger 534..554 CDD:275368
CG6808NP_001247055.1 zf-AD 9..79 CDD:214871
C2H2 Zn finger 229..249 CDD:275368 7/19 (37%)
zf-C2H2 255..277 CDD:278523 7/21 (33%)
C2H2 Zn finger 257..277 CDD:275368 7/19 (37%)
zf-H2C2_2 269..293 CDD:290200 13/79 (16%)
C2H2 Zn finger 285..305 CDD:275368 10/19 (53%)
zf-H2C2_2 299..321 CDD:290200 9/21 (43%)
C2H2 Zn finger 313..333 CDD:275368 6/19 (32%)
C2H2 Zn finger 341..359 CDD:275368 7/17 (41%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45471449
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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