DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4360 and CG11247

DIOPT Version :9

Sequence 1:NP_650879.1 Gene:CG4360 / 42413 FlyBaseID:FBgn0038787 Length:556 Species:Drosophila melanogaster
Sequence 2:NP_001097659.1 Gene:CG11247 / 40414 FlyBaseID:FBgn0037120 Length:522 Species:Drosophila melanogaster


Alignment Length:502 Identity:124/502 - (24%)
Similarity:180/502 - (35%) Gaps:165/502 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    96 LLDISTTTANSGGGGGGSHTPISPMKQEVQSVISEEEVVVD------------------------ 136
            |.|...:.::.......|..|...:|:...|:.|..:..||                        
  Fly    17 LTDSGISLSSPPAARESSPGPTLAIKRRKSSLASLRDACVDEEEDDGGEQDSKDDDYVQPQLKKS 81

  Fly   137 ----DPRKKKQ--CHVCKNKFRQLTTLRNHMKIHTDERPYKCKHCDKAFRQISTLTNHV-KIHTG 194
                :|.|:|.  |..|..:|...|.|:.||.||:||||:|||.|.|::||...|.||: ..|..
  Fly    82 ARKGEPVKRKHHVCSQCSKEFGGKTDLQRHMLIHSDERPHKCKDCGKSYRQAVNLKNHITTAHEH 146

  Fly   195 EKPFTCNICAKDFRQQSTLINHIKTHKAAESSTPTSLLNYQPQTGSGKHRKSQMHQAYQQQHQRV 259
            .|.|.|:.|.|.|..:..|..|::.| :.|...|..|.:.:...|.    :.|.|.....:....
  Fly   147 RKQFVCSQCPKSFALKERLRLHMRLH-SGEKPYPCDLCDKKFARGG----QLQQHMVSHHKTSIQ 206

  Fly   260 QISKTLYSGSYSSPA-------AEELVKPFQCSVCKRRFPQLSTLHNHERTHIDPKPYK-----C 312
            |.:.|..|.|:|:.|       ..|.....:||:|:.:|.....|    |.||:.:.:|     |
  Fly   207 QFNCTKCSASFSTNANLRVHMERHEQGMEHRCSICENQFANELAL----RAHINQEHHKLTQFEC 267

  Fly   313 ETCDKSFSQLATLANHKKIHTGDKPYTCSYCHMQFRQQSTLTNHLKTHTHQIAPGGVGGAGGGGG 377
            |.|.|.......||.|.:.||..|.:.|..|:..|.|:|....|::.||                
  Fly   268 EICHKMIEPDEDLATHMQRHTAVKTHVCEVCNTYFTQKSQYNVHMRMHT---------------- 316

  Fly   378 AVTATVDHSMPAPLAPGTQQLTSGLLPNNLHGSTANIIQLDHHPLLHFLDGSTTVSSVVATAAAN 442
                                                                             
  Fly   317 ----------------------------------------------------------------- 316

  Fly   443 TKVEHFQAGGSPSGRMTVVGTINMLKGDNPDRPFGCSVCQRFFSQQSTLVNHIKTHTGEKPYKCK 507
                                         .:||:.|.:|.:.|:..|.|..||:.||||||::|:
  Fly   317 -----------------------------GERPYQCRICHQTFAHSSVLKLHIRKHTGEKPFRCQ 352

  Fly   508 IC--EVNFRQVATLNNHM-KIHTGEKPYNCSFCPKQFRQKSTLQNHL 551
            :|  ||.|.|:|.|.||| |||..:|||.|..|...|:.|..||:|:
  Fly   353 LCEDEVAFSQLAHLKNHMKKIHKQQKPYMCEGCHDFFKIKVELQSHV 399

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4360NP_650879.1 C2H2 Zn finger 144..164 CDD:275368 7/19 (37%)
zf-H2C2_2 157..181 CDD:290200 14/23 (61%)
C2H2 Zn finger 172..192 CDD:275368 9/20 (45%)
zf-H2C2_2 185..209 CDD:290200 10/24 (42%)
C2H2 Zn finger 200..220 CDD:275368 6/19 (32%)
C2H2 Zn finger 284..304 CDD:275368 6/19 (32%)
zf-C2H2_8 287..363 CDD:292531 25/80 (31%)
C2H2 Zn finger 312..332 CDD:275368 7/19 (37%)
C2H2 Zn finger 340..360 CDD:275368 6/19 (32%)
C2H2 Zn finger 478..498 CDD:275368 7/19 (37%)
zf-H2C2_2 491..515 CDD:290200 14/25 (56%)
C2H2 Zn finger 506..526 CDD:275368 12/22 (55%)
zf-H2C2_2 519..543 CDD:290200 13/24 (54%)
C2H2 Zn finger 534..554 CDD:275368 7/18 (39%)
CG11247NP_001097659.1 COG5048 <88..247 CDD:227381 52/163 (32%)
C2H2 Zn finger 95..115 CDD:275368 7/19 (37%)
zf-H2C2_2 107..132 CDD:290200 14/24 (58%)
C2H2 Zn finger 123..144 CDD:275368 9/20 (45%)
C2H2 Zn finger 152..172 CDD:275368 6/19 (32%)
zf-H2C2_2 165..189 CDD:290200 6/24 (25%)
C2H2 Zn finger 180..200 CDD:275368 4/23 (17%)
COG5048 <192..369 CDD:227381 59/290 (20%)
C2H2 Zn finger 210..230 CDD:275370 5/19 (26%)
C2H2 Zn finger 238..260 CDD:275371 8/25 (32%)
C2H2 Zn finger 267..287 CDD:275368 7/19 (37%)
C2H2 Zn finger 295..315 CDD:275368 6/19 (32%)
zf-H2C2_2 309..332 CDD:290200 8/132 (6%)
C2H2 Zn finger 323..343 CDD:275368 7/19 (37%)
C2H2 Zn finger 351..374 CDD:275368 12/22 (55%)
C2H2 Zn finger 382..399 CDD:275368 6/16 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 144 1.000 Inparanoid score I3033
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.050

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