DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4360 and Phs

DIOPT Version :9

Sequence 1:NP_650879.1 Gene:CG4360 / 42413 FlyBaseID:FBgn0038787 Length:556 Species:Drosophila melanogaster
Sequence 2:NP_648789.3 Gene:Phs / 39697 FlyBaseID:FBgn0036522 Length:971 Species:Drosophila melanogaster


Alignment Length:599 Identity:111/599 - (18%)
Similarity:171/599 - (28%) Gaps:274/599 - (45%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 HLNHA-------TAATAAMANYQHYQLPASHGGGGGGGGGGGGGGGSNGGSGPGPNSGQQQ-PTT 58
            ||.:|       |.:.|........||.....|              ..|:....||.|:| ..:
  Fly   441 HLENAETNSKDNTESVALKETIHDKQLTIDEAG--------------KAGTQKDDNSNQKQLDKS 491

  Fly    59 LASLQQSPFA--LHQLTAVQAIQHPTHQAMLHPQHPLVHLLDISTTTANSGGGGGGSHTPI-SPM 120
            .|:..:|...  :||...|::.:  .||.|  .:.|      .::|....|.....|.||: .|:
  Fly   492 EANAGKSKMVDQVHQQMPVESAK--DHQQM--TEEP------TNSTKRKRGRKERKSPTPVLIPL 546

  Fly   121 -------------------KQEVQSVI----------SEEEVVVDDPRKKKQCHVCKNKFRQLTT 156
                               :|.|..|:          ..||..|||...........:.....|:
  Fly   547 GDKEIKEEPELPERRMRKSRQHVDYVVEIKDEEEDDDEVEEAEVDDDSSATISPHNSSTDESFTS 611

  Fly   157 LRNHMK----------IHTDERPYKCKHCDKAFRQISTLTNHVKIHTGEKPFTCNICAKDFRQQS 211
            ::....          |||      |..|.|.|::.|.:.:|:::||||||:.|..|.:.||.:.
  Fly   612 IKRESSEESQHNGIGGIHT------CNFCGKTFKRFSRMQDHLRLHTGEKPYVCGQCGRAFRLKM 670

  Fly   212 TLINHIKTHKAAESSTPTSLLNYQPQTGSGKHRKSQMHQAYQQQHQRVQISKTLYSGSYSSPAAE 276
            .|:.|...|:|.                                                     
  Fly   671 RLVEHQLRHRAE----------------------------------------------------- 682

  Fly   277 ELVKPFQCSVCKRRFPQLSTLHNHERTHIDPKPYKCETCDKSFSQLATLANHKKIHTGDKPYTCS 341
               |.::|.:|.........|..|.|.|.:.:.|||:.|:|.|.:.:.|:.|.:||||:|||:|.
  Fly   683 ---KAYKCDICSMPLATKQDLSLHMRHHKNDRRYKCDKCNKGFVRSSDLSIHVRIHTGEKPYSCD 744

  Fly   342 YCHMQFRQQSTLTNHLKTHTHQIAPGGVGGAGGGGGAVTATVDHSMPAPLAPGTQQLTSGLLPNN 406
            .|...||                                                          
  Fly   745 LCGKAFR---------------------------------------------------------- 751

  Fly   407 LHGSTANIIQLDHHPLLHFLDGSTTVSSVVATAAANTKVEHFQAGGSPSGRMTVVGTINMLKGDN 471
                                                                             
  Fly   752 ----------------------------------------------------------------- 751

  Fly   472 PDRPFGCSVCQRFFSQQSTLVNHIKTHTGEKPYKCKICEVNFRQVATLNNHMKIHTGEKPYNCSF 536
                           .:..||.|.:||.|:||.:|::|:..|.:...:..||:.|||||||||..
  Fly   752 ---------------ARQNLVVHRRTHLGDKPIQCELCDKRFARKIDMRVHMRRHTGEKPYNCDA 801

  Fly   537 CPKQFRQKSTLQNH 550
            |.:.:..:..|..|
  Fly   802 CQRGYSSRVNLLRH 815

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4360NP_650879.1 C2H2 Zn finger 144..164 CDD:275368 1/29 (3%)
zf-H2C2_2 157..181 CDD:290200 7/33 (21%)
C2H2 Zn finger 172..192 CDD:275368 6/19 (32%)
zf-H2C2_2 185..209 CDD:290200 10/23 (43%)
C2H2 Zn finger 200..220 CDD:275368 6/19 (32%)
C2H2 Zn finger 284..304 CDD:275368 5/19 (26%)
zf-C2H2_8 287..363 CDD:292531 24/75 (32%)
C2H2 Zn finger 312..332 CDD:275368 6/19 (32%)
C2H2 Zn finger 340..360 CDD:275368 4/19 (21%)
C2H2 Zn finger 478..498 CDD:275368 3/19 (16%)
zf-H2C2_2 491..515 CDD:290200 11/23 (48%)
C2H2 Zn finger 506..526 CDD:275368 5/19 (26%)
zf-H2C2_2 519..543 CDD:290200 12/23 (52%)
C2H2 Zn finger 534..554 CDD:275368 4/17 (24%)
PhsNP_648789.3 COG5048 <594..787 CDD:227381 61/392 (16%)
C2H2 Zn finger 631..651 CDD:275368 6/19 (32%)
zf-H2C2_2 644..666 CDD:290200 9/21 (43%)
zf-H2C2_2 699..724 CDD:290200 10/24 (42%)
zf-C2H2 713..735 CDD:278523 8/21 (38%)
C2H2 Zn finger 715..735 CDD:275368 6/19 (32%)
zf-H2C2_2 727..750 CDD:290200 11/22 (50%)
C2H2 Zn finger 743..763 CDD:275368 7/157 (4%)
zf-H2C2_2 755..780 CDD:290200 11/24 (46%)
C2H2 Zn finger 771..791 CDD:275368 5/19 (26%)
zf-H2C2_2 783..808 CDD:290200 12/24 (50%)
C2H2 Zn finger 799..816 CDD:275370 4/17 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24377
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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