DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4360 and dar1

DIOPT Version :9

Sequence 1:NP_650879.1 Gene:CG4360 / 42413 FlyBaseID:FBgn0038787 Length:556 Species:Drosophila melanogaster
Sequence 2:NP_001097493.1 Gene:dar1 / 38436 FlyBaseID:FBgn0263239 Length:751 Species:Drosophila melanogaster


Alignment Length:672 Identity:136/672 - (20%)
Similarity:226/672 - (33%) Gaps:187/672 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 HATAATAA--MANYQHYQL-----PASHGGGGGGG-------------GGGGGGGGSNGGSGPG- 48
            |..|.:.|  :.:.|..||     |.|:..|..|.             |.||....|.||:... 
  Fly   140 HLPAPSYASDVPHAQQQQLQPAGSPNSNSNGAYGCAPLYDGAPYEVALGYGGAVVASTGGATSSD 204

  Fly    49 -------PNSGQQQPTTLASLQQSPFALHQLTAVQAIQHPTHQAMLHPQHPLVHLLDISTTTANS 106
                   .|........|....|.|.....:|.  :||:      :.|::.|  :|..|.::.|:
  Fly   205 KEYLYETKNKEALYADPLDDPYQRPVLWDDITT--SIQN------IDPENAL--MLSSSGSSNNN 259

  Fly   107 GGGGGGSHTPISPMKQEVQ----------------SVISEEEVVVDDPRKKKQCHVCKNKFRQLT 155
            |.....|:|..|...|..|                .::|..|:..:..::::|....:.:.:|..
  Fly   260 GSSNSSSNTGESATSQLPQVKMEAIDESLLETFSTPLLSPLEIKTEKQQRQQQHQHQQQQQQQQQ 324

  Fly   156 TLRNHMKIHTDERPYKCKHCDKAFRQISTLTNHVKIHTGEKPFTCNICAKDFRQQSTLINHIKTH 220
            ..:.|.:.|  ::.|:.:|..:.::|.....:|..:.....|...::.....:||.....|:: |
  Fly   325 QQQQHQQQH--QQQYQQQHYQQHYQQQHLYQHHPSLALPGLPPAVDVVELQLQQQHQQQQHLQ-H 386

  Fly   221 KAAESSTP-----------TSLLNYQPQ------TGSGK---------------HRKSQMHQAYQ 253
            ..:.||:|           ||  :||.|      :|||.               |.....|..||
  Fly   387 NNSSSSSPKLATPGDNSGNTS--SYQQQYASQLVSGSGGGYLNGSSSNSYGYSWHSSQSFHTKYQ 449

  Fly   254 QQHQRVQISKTLYSGSYSSPAAEELVKPFQCSVCKRRFPQLSTLHNHERTHIDPKPYKCETCDKS 318
            ........|.|  :.:.::|.|:...:..|....:::..||..         ...|....|...|
  Fly   450 IHPPSAAASAT--ASATATPTAQLGAQQQQQQQQQQQLQQLCP---------PAAPSTPSTSSSS 503

  Fly   319 FSQLATLANHKKIHTGDKPYTCSYCHMQFRQQSTLTNHLKTHTHQIAPGGVGGAGGGGGAVTATV 383
            .|  ::.|:....|....|.|                     .....||..|.:.....|..|..
  Fly   504 IS--SSSASSASRHMFVPPLT---------------------PPSSDPGSPGSSMVAAAAAAAAQ 545

  Fly   384 DHSMPAPLAPGTQQLTSGLLPNNLHGSTANIIQLDHHPLLHFLDG---------STTVSSVVATA 439
            ..:.|.|  |..|....||              ::..|.|..|.|         :||::::...:
  Fly   546 RRTTPPP--PYQQGHVMGL--------------INPPPTLQLLGGAATGSNNSCTTTLTTLTPAS 594

  Fly   440 AANTKVEHFQ---------------AGGSPSGR--------------MTVVGTINMLKGDNPD-- 473
            |...:.:..|               :||...||              :..|.|:...:.:||:  
  Fly   595 AIQQQQQQPQQQQVPQQQPPPTPRSSGGGRRGRHSHHQPGTAAHIASLMSVRTVRYNRRNNPELE 659

  Fly   474 --RPFGCSV--CQRFFSQQSTLVNHIKTHTGEKPYKCK--ICEVNFRQVATLNNHMKIHTGEKPY 532
              |...|..  |.:.:::.|.|..|.:.|||||||.|:  .||..|.:...|..|.:.|||.||:
  Fly   660 KRRIHHCDFVGCSKVYTKSSHLKAHQRIHTGEKPYTCQWPECEWRFARSDELTRHYRKHTGAKPF 724

  Fly   533 NCSFCPKQFRQKSTLQNHLRVH 554
            .|..|.:.|.:...|..|::.|
  Fly   725 KCIVCERSFARSDHLALHMKRH 746

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4360NP_650879.1 C2H2 Zn finger 144..164 CDD:275368 2/19 (11%)
zf-H2C2_2 157..181 CDD:290200 4/23 (17%)
C2H2 Zn finger 172..192 CDD:275368 3/19 (16%)
zf-H2C2_2 185..209 CDD:290200 2/23 (9%)
C2H2 Zn finger 200..220 CDD:275368 3/19 (16%)
C2H2 Zn finger 284..304 CDD:275368 2/19 (11%)
zf-C2H2_8 287..363 CDD:292531 10/75 (13%)
C2H2 Zn finger 312..332 CDD:275368 4/19 (21%)
C2H2 Zn finger 340..360 CDD:275368 0/19 (0%)
C2H2 Zn finger 478..498 CDD:275368 5/21 (24%)
zf-H2C2_2 491..515 CDD:290200 13/25 (52%)
C2H2 Zn finger 506..526 CDD:275368 6/21 (29%)
zf-H2C2_2 519..543 CDD:290200 10/23 (43%)
C2H2 Zn finger 534..554 CDD:275368 5/19 (26%)
dar1NP_001097493.1 COG5048 641..>724 CDD:227381 27/82 (33%)
C2H2 Zn finger 671..688 CDD:275368 4/16 (25%)
zf-H2C2_2 680..707 CDD:290200 13/26 (50%)
C2H2 Zn finger 696..718 CDD:275368 6/21 (29%)
zf-H2C2_2 710..735 CDD:290200 10/24 (42%)
C2H2 Zn finger 726..746 CDD:275368 5/19 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
00.000

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