DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4360 and Paris

DIOPT Version :10

Sequence 1:NP_650879.1 Gene:CG4360 / 42413 FlyBaseID:FBgn0038787 Length:556 Species:Drosophila melanogaster
Sequence 2:NP_608840.1 Gene:Paris / 33657 FlyBaseID:FBgn0031610 Length:346 Species:Drosophila melanogaster


Alignment Length:429 Identity:104/429 - (24%)
Similarity:145/429 - (33%) Gaps:180/429 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly   112 GSHTPISPMKQEVQSVISEEE-------VVVDDPRK---KK---QCHVCKNKFRQLTTLRNHMKI 163
            |....:..:.:|....|||:|       ...||..|   ||   :|..|..|:::..|...||:.
  Fly    83 GIEDALCALLEEEDWEISEDEDARIDSASAADDDGKSDSKKVAFECRECHKKYQRKGTFLRHMRT 147

  Fly   164 HTDERPYKCKHCDKAFRQISTLTNHVKIHTGEKPFTCNICAKDFRQQSTLINHIKTHKAAESSTP 228
            |.|.:.:.|.:|.:.||...||..|:|.|...||:.|:.|||.|.|||||.:|.:||        
  Fly   148 HMDGQSFPCPYCKRNFRLRVTLKAHMKTHNAAKPYECSHCAKTFAQQSTLQSHERTH-------- 204

  Fly   229 TSLLNYQPQTGSGKHRKSQMHQAYQQQHQRVQISKTLYSGSYSSPAAEELVKPFQCSVCKRRFPQ 293
                     ||.                                       :||:||.|.:.|.:
  Fly   205 ---------TGE---------------------------------------RPFKCSQCSKTFIK 221

  Fly   294 LSTLHNHERTHIDPKPYKCETCDKSFSQLATLANHKKIHTGDKPYTCSYCHMQFRQQSTLTNHLK 358
            .|.|..|.|||...:|:||..|.|:|::...|.||.:.|||::|:.||:|...|    .:..|||
  Fly   222 SSDLRRHIRTHGSERPFKCSKCTKTFTRKFHLDNHFRSHTGERPFKCSHCPKAF----AMKQHLK 282

  Fly   359 THTHQIAPGGVGGAGGGGGAVTATVDHSMPAPLAPGTQQLTSGLLPNNLHGSTANIIQLDHHPLL 423
            .|:.                                                            |
  Fly   283 QHSR------------------------------------------------------------L 287

  Fly   424 HFLDGSTTVSSVVATAAANTKVEHFQAGGSPSGRMTVVGTINMLKGDNPDRPFGCSVCQRFFSQQ 488
            |.                                              |||||.||.|.:.|...
  Fly   288 HL----------------------------------------------PDRPFRCSHCPKTFRLS 306

  Fly   489 STLVNHIKTHTGEKPYKCKICEVNFRQVATLNNH-MKIH 526
            |||..|...|..|:.:||..|...::|..||..| ::||
  Fly   307 STLKEHKLVHNAERTFKCPHCASFYKQRKTLARHILEIH 345

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4360NP_650879.1 C2H2 Zn finger 144..164 CDD:275368 6/19 (32%)
zf-H2C2_2 157..181 CDD:463886 7/23 (30%)
C2H2 Zn finger 172..192 CDD:275368 8/19 (42%)
C2H2 Zn finger 200..220 CDD:275368 11/19 (58%)
zf-C2H2_8 281..366 CDD:464935 33/84 (39%)
C2H2 Zn finger 284..304 CDD:275368 8/19 (42%)
C2H2 Zn finger 312..332 CDD:275368 7/19 (37%)
zf-H2C2_2 325..349 CDD:463886 11/23 (48%)
C2H2 Zn finger 340..360 CDD:275368 7/19 (37%)
C2H2 Zn finger 478..498 CDD:275368 8/19 (42%)
C2H2 Zn finger 506..526 CDD:275368 6/20 (30%)
zf-H2C2_2 519..543 CDD:463886 4/9 (44%)
C2H2 Zn finger 534..554 CDD:275368
ParisNP_608840.1 zf-AD 4..78 CDD:462262
C2H2 Zn finger 128..148 CDD:275368 6/19 (32%)
C2H2 Zn finger 156..176 CDD:275368 8/19 (42%)
COG5048 <180..341 CDD:227381 73/326 (22%)
C2H2 Zn finger 184..204 CDD:275368 11/19 (58%)
C2H2 Zn finger 212..232 CDD:275368 8/19 (42%)
C2H2 Zn finger 240..260 CDD:275368 7/19 (37%)
C2H2 Zn finger 268..288 CDD:275368 8/83 (10%)
C2H2 Zn finger 296..316 CDD:275368 8/19 (42%)
C2H2 Zn finger 324..341 CDD:275368 5/16 (31%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.